RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SHOC2Q9UQ13 582 aa4.88□□□□□ -1.63
USP48-211ENST00000526044 INSL6Q9Y581 213 aa4.88□□□□□ -1.63
USP48-211ENST00000526044 PCDHA10Q9Y5I2 948 aa4.88□□□□□ -1.63
USP48-211ENST00000526044 WDR81Q562E7 1941 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 A0A087WWL8 130 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 A0A1B0GVL5 298 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 PP2D1A8MPX8 630 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 MYO1FO00160 1098 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 POLR2DO15514 142 aaKnown RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 FRS3O43559 492 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 ZNF500O60304 480 aaPredicted RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 ZBED1O96006 694 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 CCNE2O96020 404 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 SUPT20HL2P0C7V6 817 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 RPA1P27694 616 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 TCF7P36402 384 aaPredicted RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 CCT6AP40227 531 aaKnown RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 GRIA3P42263 894 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 SYKP43405 635 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 QARSP47897 775 aaKnown RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 CPT1AP50416 773 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 ATXN1P54253 815 aaKnown RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 WNT3P56703 355 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 LILRA4P59901 499 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 PSMC5P62195 406 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 ARHGAP1Q07960 439 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 SLC13A2Q13183 592 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 CTBP1Q13363 440 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 RAB32Q13637 225 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 CTTNQ14247 550 aaKnown RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 HSDL1Q3SXM5 330 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 MAP3K21Q5TCX8 1036 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 RNF220Q5VTB9 566 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 RESP18Q5W5W9 173 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 CCSAPQ6IQ19 270 aaPredicted RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 PPP4R4Q6NUP7 873 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 DARS2Q6PI48 645 aaKnown RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 CCDC73Q6ZRK6 1079 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 USP49Q70CQ1 688 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 OTUD6AQ7L8S5 288 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 PLPPR4Q7Z2D5 763 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 TLK2Q86UE8 772 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 CATSPER3Q86XQ3 398 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 FSIP1Q8NA03 581 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 IQUBQ8NA54 791 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 FAM156AQ8NDB6 213 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 RASSF8Q8NHQ8 419 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 PPTC7Q8NI37 304 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 NEK9Q8TD19 979 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 AFG1LQ8WV93 481 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 GLG1Q92896 1179 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 FKBP10Q96AY3 582 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 PLIN2Q99541 437 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 HSD17B14Q9BPX1 270 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 PYM1Q9BRP8 204 aaKnown RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 POLR3CQ9BUI4 534 aaPredicted RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 SMARCAD1Q9H4L7 1026 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 AZI2Q9H6S1 392 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 TUFT1Q9NNX1 390 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 ALG13Q9NP73 1137 aaKnown RBP4.87□□□□□ -1.63
USP48-211ENST00000526044 XPNPEP3Q9NQH7 507 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 ZNF302Q9NR11 478 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 NRBP2Q9NSY0 501 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 RGL1Q9NZL6 768 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 PAXBP1Q9Y5B6 917 aa4.87□□□□□ -1.63
USP48-211ENST00000526044 LRRC37A2A6NM11 1700 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 KAT6AQ92794 2004 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 A0A087WWV3 80 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 IGKV6D-21A0A0A0MT36 114 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 FAM237AA0A1B0GTK4 181 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 WDR27A2RRH5 827 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 ISM1B1AKI9 464 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 VWC2LB2RUY7 222 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 TPP1O14773 563 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 MED24O75448 989 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 PGK1P00558 417 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 TFRCP02786 760 aaKnown RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 MYL3P08590 195 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 CCL5P13501 91 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 PFKFB1P16118 471 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 MUTP22033 750 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 PPIFP30405 207 aaKnown RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 LRPAP1P30533 357 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 NDUFA8P51970 172 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 MAPK10P53779 464 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 CACNA2D1P54289 1103 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 SUMO3P55854 103 aaPredicted RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 FAM193AP78312 1265 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 BEX3Q00994 111 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 CYP4A11Q02928 519 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 E2F2Q14209 437 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 TBCCQ15814 346 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 KIAA0753Q2KHM9 967 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 SLC44A4Q53GD3 710 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 C10orf62Q5T681 223 aaPredicted RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 HAUS3Q68CZ6 603 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 TRMT1LQ7Z2T5 733 aaKnown RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 PEG10Q86TG7 708 aaKnown RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 DTX2Q86UW9 622 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 C4orf19Q8IY42 314 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms