RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 ANAPC7Q9UJX3 599 aa13.09□□□□□ -0.31
HDAC2-217ENST00000524334 ATXN2Q99700 1313 aaKnown RBP13.09□□□□□ -0.31
HDAC2-217ENST00000524334 EP300Q09472 2414 aaPredicted RBP13.08□□□□□ -0.32
HDAC2-217ENST00000524334 FAM47DPA6NHR8 397 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 EEF2KO00418 725 aaKnown RBP13.08□□□□□ -0.32
HDAC2-217ENST00000524334 ARHGAP33O14559 1287 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 BCAT2O15382 392 aaPredicted RBP13.08□□□□□ -0.32
HDAC2-217ENST00000524334 FSBPO95073 299 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 ENGP17813 658 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 CD27P26842 260 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 DNA2P51530 1060 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 CCR5P51681 352 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 FOXK2Q01167 660 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 TBX2Q13207 712 aaPredicted RBP13.08□□□□□ -0.32
HDAC2-217ENST00000524334 SERINC3Q13530 473 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 INO80DQ53TQ3 878 aaPredicted RBP13.08□□□□□ -0.32
HDAC2-217ENST00000524334 CARD16Q5EG05 197 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 KIAA0895LQ68EN5 471 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 RFX8Q6ZV50 586 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 ZNF354CQ86Y25 554 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 OR14C36Q8NHC7 312 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 PIP4K2CQ8TBX8 421 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 FAM131CQ96AQ9 280 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 PPP1R16AQ96I34 528 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 TNKS2Q9H2K2 1166 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 ZWILCHQ9H900 591 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 NHEJ1Q9H9Q4 299 aaPredicted RBP13.08□□□□□ -0.32
HDAC2-217ENST00000524334 DYRK4Q9NR20 520 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 GPATCH2LQ9NWQ4 482 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 CTTNBP2NLQ9P2B4 639 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 UVRAGQ9P2Y5 699 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 SERGEFQ9UGK8 458 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 IL36AQ9UHA7 158 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 EIF2B4Q9UI10 523 aaKnown RBP13.08□□□□□ -0.32
HDAC2-217ENST00000524334 SARDHQ9UL12 918 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 NENFQ9UMX5 172 aa13.08□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3DA0A087WVF3 549 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3IA0A087WXS9 549 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3EA0A087X179 549 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3KA0A087X1G2 549 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3FA6NER0 549 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 C4orf47A7E2U8 309 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3LB9A6J9 549 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 RASA4BC9J798 803 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 CDX4O14627 284 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TM4SF5O14894 197 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 RASA4O43374 803 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 BUB1O43683 1085 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 ZNF821O75541 412 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 CD160O95971 181 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TMEM253P0C7T8 217 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3HP0C7X1 549 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 DRD3P35462 400 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 NUDT1P36639 197 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 ARL4AP40617 200 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 AFF3P51826 1226 aaKnown RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TEAD4Q15561 434 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 CA9Q16790 459 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 ARSIQ5FYB1 569 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 PPP6R3Q5H9R7 873 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3GQ6DHY5 549 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3CQ6IPX1 549 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 NCEH1Q6PIU2 408 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 DPY19L3Q6ZPD9 716 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 CYP4V2Q6ZWL3 525 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TBC1D3Q8IZP1 549 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 LZTR1Q8N653 840 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 C1orf216Q8TAB5 229 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 SNX19Q92543 992 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 ARHGEF26Q96DR7 871 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 LRIG1Q96JA1 1093 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 PEBP4Q96S96 227 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 CHP1Q99653 195 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 HEPHQ9BQS7 1158 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 NOL6Q9H6R4 1146 aaKnown RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 LAMA1P25391 3075 aa13.07□□□□□ -0.32
HDAC2-217ENST00000524334 PTPRZ1P23471 2315 aaPredicted RBP13.07□□□□□ -0.32
HDAC2-217ENST00000524334 ARHGAP42A6NI28 874 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 H3BRJ5 948 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 KPNA3O00505 521 aaPredicted RBP13.06□□□□□ -0.32
HDAC2-217ENST00000524334 POP4O95707 220 aaKnown RBP13.06□□□□□ -0.32
HDAC2-217ENST00000524334 GSRP00390 522 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 IGHV4-34P06331 123 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 ERCC2P18074 760 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 ADPRHP54922 357 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 SNRPD1P62314 119 aaKnown RBP13.06□□□□□ -0.32
HDAC2-217ENST00000524334 CNTN1Q12860 1018 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 DPYSL2Q16555 572 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 KCNT1Q5JUK3 1230 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 NEK5Q6P3R8 708 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 IL27RAQ6UWB1 636 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 ZCCHC9Q8N567 271 aaKnown RBP13.06□□□□□ -0.32
HDAC2-217ENST00000524334 ZNF564Q8TBZ8 553 aaPredicted RBP13.06□□□□□ -0.32
HDAC2-217ENST00000524334 HSPH1Q92598 858 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 SKA1Q96BD8 255 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 HMCESQ96FZ2 354 aa13.06□□□□□ -0.32
HDAC2-217ENST00000524334 MRFAP1L1Q96HT8 127 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms