RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 ZC3H14Q6PJT7 736 aaKnown RBP13.07□□□□□ -0.32
VEGFA-224ENST00000523873 NPNTQ6UXI9 565 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 FAM124AQ86V42 546 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 KBTBD6Q86V97 674 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 RFX6Q8HWS3 928 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 MAP7D3Q8IWC1 876 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 TXLNBQ8N3L3 684 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 DEFB119Q8N690 84 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 OR6K2Q8NGY2 324 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 KIAA1524Q8TCG1 905 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 RNF157Q96PX1 679 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 SP110Q9HB58 689 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 LZTFL1Q9NQ48 299 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 DDX56Q9NY93 547 aaKnown RBP13.07□□□□□ -0.32
VEGFA-224ENST00000523873 SARDHQ9UL12 918 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 GON4LQ3T8J9 2241 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 IGHV1OR15-9A0A0B4J2B8 117 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 NRDCO43847 1150 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 PRAMEF11O60813 436 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 IL1BP01584 269 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 CTNNA2P26232 953 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
VEGFA-224ENST00000523873 SLC20A2Q08357 652 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 SLC10A2Q12908 348 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-224ENST00000523873 ELAVL3Q14576 367 aaKnown RBP13.06□□□□□ -0.32
VEGFA-224ENST00000523873 PAFAH1B3Q15102 231 aaKnown RBP13.06□□□□□ -0.32
VEGFA-224ENST00000523873 USP39Q53GS9 565 aaKnown RBP13.06□□□□□ -0.32
VEGFA-224ENST00000523873 ODF2Q5BJF6 829 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 FAM182AQ5T1J6 154 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 KAZNQ674X7 775 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 AADACL2Q6P093 401 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 SPOCD1Q6ZMY3 1216 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 DPY19L3Q6ZPD9 716 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 NT5DC3Q86UY8 548 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 KATNAL2Q8IYT4 538 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 RYBPQ8N488 228 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-224ENST00000523873 PLD5Q8N7P1 536 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 OR2A12Q8NGT7 310 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 OR8D1Q8WZ84 308 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 EXOC2Q96KP1 924 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 TSGA10Q9BZW7 698 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 DONSONQ9NYP3 566 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 LHX3Q9UBR4 397 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 UBA2Q9UBT2 640 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-224ENST00000523873 SERGEFQ9UGK8 458 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 IPO11Q9UI26 975 aaKnown RBP13.06□□□□□ -0.32
VEGFA-224ENST00000523873 PPP2R2CQ9Y2T4 447 aa13.06□□□□□ -0.32
VEGFA-224ENST00000523873 A0A1W2PP55 124 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ZSCAN5CA6NGD5 496 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 APOL1O14791 398 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 DNTTP04053 509 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ACADMP11310 421 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 CHRNA3P32297 505 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 SLC8A1P32418 973 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 SERPINB6P35237 376 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 CDKN2BP42772 138 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 TPMTP51580 245 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 CCNHP51946 323 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 RHOAP61586 193 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 IL10RBQ08334 325 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ADCY2Q08462 1091 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 CST6Q15828 149 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 IFI16Q16666 785 aaKnown RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 CARD16Q5EG05 197 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 B4GALNT4Q76KP1 1039 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ARMCX6Q7L4S7 300 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 PEX26Q7Z412 305 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 CCDC50Q8IVM0 306 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ATPAF2Q8N5M1 289 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 AADATQ8N5Z0 425 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 LZTR1Q8N653 840 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 PCDH20Q8N6Y1 951 aaKnown RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 SUMF1Q8NBK3 374 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 PIP4K2CQ8TBX8 421 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 GRIN3AQ8TCU5 1115 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 GANCQ8TET4 914 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ALG3Q92685 438 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 SPACA7Q96KW9 195 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 CALR3Q96L12 384 aaKnown RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 HERPUD2Q9BSE4 406 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 MAK16Q9BXY0 300 aaKnown RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 CEP44Q9C0F1 390 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 EPC1Q9H2F5 836 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 PABPC3Q9H361 631 aaKnown RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ZDHHC6Q9H6R6 413 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 FBRSQ9HAH7 460 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ITM2CQ9NQX7 267 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 USP36Q9P275 1121 aaKnown RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 AMFRQ9UKV5 643 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 SMG5Q9UPR3 1016 aaKnown RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 ARIH1Q9Y4X5 557 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-224ENST00000523873 PCDHA3Q9Y5H8 950 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 TRPM6Q9BX84 2022 aa13.05□□□□□ -0.32
VEGFA-224ENST00000523873 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 MCF2LO15068 1137 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 INSIG1O15503 277 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 DDX3YO15523 660 aaKnown RBP13.04□□□□□ -0.32
VEGFA-224ENST00000523873 MAP3K13O43283 966 aa13.04□□□□□ -0.32
VEGFA-224ENST00000523873 KRT86O43790 486 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms