RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 IMPG2Q9BZV3 1241 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 NYXQ9GZU5 481 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 EPB41L4BQ9H329 900 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 NCOR1P1Q9H4R4 102 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 GSTO2Q9H4Y5 243 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 C7orf69Q9H7B7 122 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 NRDE2Q9H7Z3 1164 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 MMRN2Q9H8L6 949 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 GBA2Q9HCG7 927 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 DLL4Q9NR61 685 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 IARS2Q9NSE4 1012 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 THAP1Q9NVV9 213 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 OGFRQ9NZT2 677 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 Q9UFV3 132 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CDC42EP3Q9UKI2 254 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CDH7Q9ULB5 785 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 MRPS17Q9Y2R5 130 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3DA0A087WVF3 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3IA0A087WXS9 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3EA0A087X179 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3KA0A087X1G2 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 LOC102723996A0A087X1L8 192 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3BA6NDS4 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3FA6NER0 549 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 FAM90A8PA6NJQ4 464 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 A6NL46 340 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CXorf49A8MYA2 514 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 EIF3CLB5ME19 914 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3LB9A6J9 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 M0QZQ0 153 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 SLC33A1O00400 549 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 SRGAP3O43295 1099 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 LETM1O95202 739 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 ADCY5O95622 1261 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 KLKB1P03952 638 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 FAM90A13PP0C7W8 464 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 FAM90A24PP0C7X0 464 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3HP0C7X1 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TPBGLP0DKB5 382 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 HK1P19367 917 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 DRD1P21728 446 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 SDHBP21912 280 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ANP32AP39687 249 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 PBX1P40424 430 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 MAGEA4P43358 317 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 GSTM5P46439 218 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ATP5OP48047 213 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 PCP4P48539 62 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ZNF134P52741 427 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 MVDP53602 400 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 PRKAG1P54619 331 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 EPHB4P54760 987 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ACTR1AP61163 376 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TRA2BP62995 288 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 ARHGAP8P85298 464 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 RUNX2Q13950 521 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 PCOLCEQ15113 449 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 GSTA3Q16772 222 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 GEN1Q17RS7 908 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 USP39Q53GS9 565 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 C10orf76Q5T2E6 689 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 FAM171A1Q5VUB5 890 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3GQ6DHY5 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3CQ6IPX1 549 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 NAPEPLDQ6IQ20 393 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ARHGAP11AQ6P4F7 1023 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 PPP1R21Q6ZMI0 780 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ATG14Q6ZNE5 492 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 C15orf52Q6ZUT6 534 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 KRT27Q7Z3Y8 459 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CAMKMTQ7Z624 323 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 AACSQ86V21 672 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CEP57Q86XR8 500 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 MAML2Q8IZL2 1156 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 TBC1D3Q8IZP1 549 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 POU5F2Q8N7G0 328 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 STPG3Q8N7X2 389 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 SLC35B2Q8TB61 432 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 NEK9Q8TD19 979 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ST7LQ8TDW4 575 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CLEC4CQ8WTT0 213 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 RAB40AQ8WXH6 277 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CNOT9Q92600 299 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 MMABQ96EY8 250 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 ELMOD3Q96FG2 381 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CLMNQ96JQ2 1002 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 GSDMAQ96QA5 445 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 PIMREGQ9BSJ6 248 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 UTP14AQ9BVJ6 771 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 NUP85Q9BW27 656 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 OSGEPL1Q9H4B0 414 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CXorf36Q9H7Y0 433 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 C17orf75Q9HAS0 396 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 KCNK9Q9NPC2 374 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ARHGEF38Q9NXL2 777 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 CWC15Q9P013 229 aaKnown RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 PEMTQ9UBM1 199 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 ZFP69BQ9UJL9 534 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 LEF1Q9UJU2 399 aaPredicted RBP4.16□□□□□ -1.74
SKP1-209ENST00000522552 PTBP2Q9UKA9 531 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms