RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CTTNBP2NLQ9P2B4 639 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.07■□□□□ 0.96
TRIM35-203ENST00000521253 FARP1Q9Y4F1 1045 aaPredicted RBP21.07■□□□□ 0.96
TRIM35-203ENST00000521253 FAM47DPA6NHR8 397 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 RASA4BC9J798 803 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 C1QTNF3-AMACRE9PGA6 284 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 PLK4O00444 970 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 SLC30A4O14863 429 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 RASA4O43374 803 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 KDELR3O43731 214 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 H2AFZP0C0S5 128 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 CHRNA3P32297 505 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 ZNF75DP51815 510 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 LIMK1P53667 647 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 YBEYP58557 167 aaPredicted RBP21.06■□□□□ 0.96
TRIM35-203ENST00000521253 PARP15Q460N3 678 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 BOLA3Q53S33 107 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 STPG1Q5TH74 334 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 DPY19L3Q6ZPD9 716 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 RFX8Q6ZV50 586 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 H2AFVQ71UI9 128 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 ZNF354CQ86Y25 554 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 PCDH20Q8N6Y1 951 aaKnown RBP21.06■□□□□ 0.96
TRIM35-203ENST00000521253 CHST14Q8NCH0 376 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 SNX19Q92543 992 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 KLC2Q9H0B6 622 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 MIR1-1HGQ9H1L0 117 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 ZWILCHQ9H900 591 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 CAPN10Q9HC96 672 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 FSCN3Q9NQT6 498 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 UVRAGQ9P2Y5 699 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 SUSD2Q9UGT4 822 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 EIF2B4Q9UI10 523 aaKnown RBP21.06■□□□□ 0.96
TRIM35-203ENST00000521253 SLC6A14Q9UN76 642 aa21.06■□□□□ 0.96
TRIM35-203ENST00000521253 DAPK3O43293 454 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 FSBPO95073 299 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 SERPINF2P08697 491 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 GNSP15586 552 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 RECQLP46063 649 aaPredicted RBP21.05■□□□□ 0.96
TRIM35-203ENST00000521253 ADPRHP54922 357 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 GEMIN4P57678 1058 aaKnown RBP21.05■□□□□ 0.96
TRIM35-203ENST00000521253 SLC25A11Q02978 314 aaKnown RBP21.05■□□□□ 0.96
TRIM35-203ENST00000521253 DPYSL2Q16555 572 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 TXNRD3NBQ6F5E7 133 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 NCEH1Q6PIU2 408 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.05■□□□□ 0.96
TRIM35-203ENST00000521253 ZCCHC9Q8N567 271 aaKnown RBP21.05■□□□□ 0.96
TRIM35-203ENST00000521253 TC2NQ8N9U0 490 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 OR14C36Q8NHC7 312 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 HSPH1Q92598 858 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 FAM131CQ96AQ9 280 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 BIRC7Q96CA5 298 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 RTKNQ9BST9 563 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 LRRC19Q9H756 370 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 DONSONQ9NYP3 566 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 CWC15Q9P013 229 aaKnown RBP21.05■□□□□ 0.96
TRIM35-203ENST00000521253 CEP192Q8TEP8 1941 aa21.05■□□□□ 0.96
TRIM35-203ENST00000521253 ZSCAN5CA6NGD5 496 aaPredicted RBP21.04■□□□□ 0.96
TRIM35-203ENST00000521253 LRRC72A6NJI9 287 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 RNF103O00237 685 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 BUB1O43683 1085 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 TMEM253P0C7T8 217 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 RARAP10276 462 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 ENGP17813 658 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 ERCC2P18074 760 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 DNA2P51530 1060 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 ZNF135P52742 658 aaPredicted RBP21.04■□□□□ 0.96
TRIM35-203ENST00000521253 NDST2P52849 883 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 CNTN1Q12860 1018 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 SERINC3Q13530 473 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 CARD16Q5EG05 197 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 KIAA0895LQ68EN5 471 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 TMIEQ8NEW7 156 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 OR2T34Q8NGX1 318 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 C1orf216Q8TAB5 229 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 GRIN3AQ8TCU5 1115 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 ISG20Q96AZ6 181 aaKnown RBP21.04■□□□□ 0.96
TRIM35-203ENST00000521253 MRFAP1L1Q96HT8 127 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 CELF6Q96J87 481 aaKnown RBP21.04■□□□□ 0.96
TRIM35-203ENST00000521253 TM6SF2Q9BZW4 377 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.04■□□□□ 0.96
TRIM35-203ENST00000521253 IL36AQ9UHA7 158 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 SLCO1B1Q9Y6L6 691 aa21.04■□□□□ 0.96
TRIM35-203ENST00000521253 CHD5Q8TDI0 1954 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 NYNRINQ9P2P1 1898 aaKnown RBP21.03■□□□□ 0.96
TRIM35-203ENST00000521253 A0A1B0GTW7 788 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 KPNA3O00505 521 aaPredicted RBP21.03■□□□□ 0.96
TRIM35-203ENST00000521253 CDX4O14627 284 aaPredicted RBP21.03■□□□□ 0.96
TRIM35-203ENST00000521253 PRNPP04156 253 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 IGHV4-34P06331 123 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 HCAR3P49019 387 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 CCNHP51946 323 aaPredicted RBP21.03■□□□□ 0.96
TRIM35-203ENST00000521253 DPYSQ14117 519 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 ARSIQ5FYB1 569 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 AGBL4Q5VU57 503 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 CPNE8Q86YQ8 564 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 TEKT4Q8WW24 435 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 OSGEPQ9NPF4 335 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 TMEM9BQ9NQ34 198 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 WASF2Q9Y6W5 498 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms