RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 FAM90A2PQ658T7 463 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 HMBOX1Q6NT76 420 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 ZNF474Q6S9Z5 364 aaPredicted RBP4.58□□□□□ -1.68
CLK4-207ENST00000520909 ZNF34Q8IZ26 560 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 OVCA2Q8WZ82 227 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 GCC1Q96CN9 775 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 DCLK3Q9C098 648 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 CDH19Q9H159 772 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 C1orf112Q9NSG2 853 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 SRP68Q9UHB9 627 aaKnown RBP4.58□□□□□ -1.68
CLK4-207ENST00000520909 TRMT112Q9UI30 125 aaKnown RBP4.58□□□□□ -1.68
CLK4-207ENST00000520909 SLC8A2Q9UPR5 921 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 NIP7Q9Y221 180 aaKnown RBP eCLIP4.58□□□□□ -1.68
CLK4-207ENST00000520909 EP400Q96L91 3159 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 BTAF1O14981 1849 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 BRWD3Q6RI45 1802 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 NHSQ6T4R5 1651 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 LAMB4A4D0S4 1761 aa4.58□□□□□ -1.68
CLK4-207ENST00000520909 GAGE12JA6NER3 117 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 CCNT2O60583 730 aaKnown RBP4.57□□□□□ -1.68
CLK4-207ENST00000520909 CBFA2T3O75081 653 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 SURF6O75683 361 aaKnown RBP4.57□□□□□ -1.68
CLK4-207ENST00000520909 KLKB1P03952 638 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 ATICP31939 592 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 OS9Q13438 667 aaPredicted RBP4.57□□□□□ -1.68
CLK4-207ENST00000520909 POLD3Q15054 466 aaPredicted RBP4.57□□□□□ -1.68
CLK4-207ENST00000520909 SHBQ15464 509 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 PARP10Q53GL7 1025 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 TMEM196Q5HYL7 178 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.57□□□□□ -1.68
CLK4-207ENST00000520909 TTC39AQ5SRH9 613 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 ASPHD1Q5U4P2 390 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 SUSD4Q5VX71 490 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 ACSM6Q6P461 480 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 CLEC4GQ6UXB4 293 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 Q6ZTK2 550 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 CTU1Q7Z7A3 348 aaKnown RBP4.57□□□□□ -1.68
CLK4-207ENST00000520909 CHD1LQ86WJ1 897 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 LAS2Q8IYD9 372 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 MSLNLQ96KJ4 702 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 WDR24Q96S15 920 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 UTP14AQ9BVJ6 771 aaKnown RBP4.57□□□□□ -1.68
CLK4-207ENST00000520909 CDCP1Q9H5V8 836 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 PLAC1Q9HBJ0 212 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 ZBTB26Q9HCK0 441 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 TMOD4Q9NZQ9 345 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 NARFQ9UHQ1 456 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 EXOC6BQ9Y2D4 811 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 IBTKQ9P2D0 1353 aaPredicted RBP4.57□□□□□ -1.68
CLK4-207ENST00000520909 CKAP5Q14008 2032 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 TJP1Q07157 1748 aa4.57□□□□□ -1.68
CLK4-207ENST00000520909 UBN2Q6ZU65 1347 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 BTBD18B2RXH4 712 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 PLGP00747 810 aaPredicted RBP4.56□□□□□ -1.68
CLK4-207ENST00000520909 CYP1A2P05177 515 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 HOXD3P31249 432 aaPredicted RBP4.56□□□□□ -1.68
CLK4-207ENST00000520909 GPS1Q13098 491 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 G3BP1Q13283 466 aaKnown RBP eCLIP4.56□□□□□ -1.68
CLK4-207ENST00000520909 HSP90AB4PQ58FF6 505 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 TBC1D9BQ66K14 1250 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 ABLIM2Q6H8Q1 611 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 PRSS57Q6UWY2 283 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 URB1-AS1Q96HZ7 61 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 LRRCC1Q9C099 1032 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 SIL1Q9H173 461 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 SPAG4Q9NPE6 437 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 HEYLQ9NQ87 328 aaPredicted RBP4.56□□□□□ -1.68
CLK4-207ENST00000520909 ZIM2Q9NZV7 527 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 PA2G4Q9UQ80 394 aaKnown RBP4.56□□□□□ -1.68
CLK4-207ENST00000520909 PTGDR2Q9Y5Y4 395 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 MYH14Q7Z406 1995 aaKnown RBP4.56□□□□□ -1.68
CLK4-207ENST00000520909 SBF2Q86WG5 1849 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 SH3TC1Q8TE82 1336 aa4.56□□□□□ -1.68
CLK4-207ENST00000520909 USP42Q9H9J4 1324 aaKnown RBP4.56□□□□□ -1.68
CLK4-207ENST00000520909 DENND3A2RUS2 1198 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 ANKRD62A6NC57 917 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 NTN3O00634 580 aaPredicted RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 NPHP1O15259 732 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 MGEA5O60502 916 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 COQ9O75208 318 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 IL18RAPO95256 599 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 NFATC1O95644 943 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 NTSR2O95665 410 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 ERVFC1-1P60608 527 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 Q0VFX4 171 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 IFIT5Q13325 482 aaKnown RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 CCDC57Q2TAC2 916 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 RABL6Q3YEC7 729 aaPredicted RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 CXorf57Q6NSI4 855 aaKnown RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 TLDC1Q6P9B6 456 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 FAM83HQ6ZRV2 1179 aaPredicted RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 DEFB132Q7Z7B7 95 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 NBPF5PQ86XG9 351 aaPredicted RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 ERC1Q8IUD2 1116 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 CLASRPQ8N2M8 674 aaKnown RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 GLMPQ8WWB7 406 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 GPR78Q96P69 363 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 STRBPQ96SI9 672 aaKnown RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 NYXQ9GZU5 481 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 MAP6D1Q9H9H5 199 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms