RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 FAM205BPQ63HN1 556 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 COLCA1Q6ZS62 124 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 FAM57BQ71RH2 274 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 SAMD14Q8IZD0 417 aaPredicted RBP4.4□□□□□ -1.71
SQLE-204ENST00000520493 TNIP2Q8NFZ5 429 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 LINS1Q8NG48 757 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 AKAP1Q92667 903 aaKnown RBP eCLIP4.4□□□□□ -1.71
SQLE-204ENST00000520493 STAMQ92783 540 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 TUBB6Q9BUF5 446 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 PHF7Q9BWX1 381 aaPredicted RBP4.4□□□□□ -1.71
SQLE-204ENST00000520493 INTS2Q9H0H0 1204 aaKnown RBP4.4□□□□□ -1.71
SQLE-204ENST00000520493 STN1Q9H668 368 aaKnown RBP4.4□□□□□ -1.71
SQLE-204ENST00000520493 RMI1Q9H9A7 625 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 SFXN1Q9H9B4 322 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 ANKEF1Q9NU02 776 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 TMEM45AQ9NWC5 275 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 TAS2R10Q9NYW0 307 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 HSF4Q9ULV5 492 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 RCE1Q9Y256 329 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 PCDHB2Q9Y5E7 798 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 SPATA31A5Q5VU36 1347 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 SPATA31A7Q8IWB4 1347 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 FAM90A7PA6NKC0 464 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 C2CD4BA6NLJ0 364 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 FAM90A22PA8MWA6 464 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 FAM90A12PA8MX19 464 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 FAM90A23PA8MXZ1 464 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 F8W810 466 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 GRM8O00222 908 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 PEX12O00623 359 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 SPTLC2O15270 562 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 CCNT1O60563 726 aaKnown RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 SGPL1O95470 568 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 WEE2P0C1S8 567 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 HSPA1AP0DMV8 641 aaKnown RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 HSPA1BP0DMV9 641 aaKnown RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 PSG1P11464 419 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 ALOX12P18054 663 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 TFEBP19484 476 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 PRKCHP24723 683 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 CCR9P51686 369 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 MVDP53602 400 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 CDK18Q07002 472 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 MTX1Q13505 466 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 ALKBH1Q13686 389 aaKnown RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 ERV3-1Q14264 604 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 NFIL3Q16649 462 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 EARS2Q5JPH6 523 aaKnown RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 RBM44Q6ZP01 1051 aaKnown RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 R3HCC1LQ7Z5L2 792 aaKnown RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 ZDHHC17Q8IUH5 632 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 RPAP2Q8IXW5 612 aaPredicted RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 CCDC105Q8IYK2 499 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 NGEFQ8N5V2 710 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 NKAIN3Q8N8D7 197 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 RFWD2Q8NHY2 731 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 KAT2BQ92831 832 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 PRR11Q96HE9 360 aaPredicted RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 ZNF845Q96IR2 970 aaPredicted RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 NLRP4Q96MN2 994 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 SDF4Q9BRK5 362 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 HERC2P3Q9BVR0 1158 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 ELOVL1Q9BW60 279 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 SCNM1Q9BWG6 230 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 TM2D2Q9BX73 214 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 TRIM2Q9C040 744 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 ARHGAP39Q9C0H5 1083 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 IL21RQ9HBE5 538 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 THAP1Q9NVV9 213 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 ASNSD1Q9NWL6 643 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 IPO11Q9UI26 975 aaKnown RBP4.39□□□□□ -1.71
SQLE-204ENST00000520493 OSGIN2Q9Y236 505 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 CNPY2Q9Y2B0 182 aa4.39□□□□□ -1.71
SQLE-204ENST00000520493 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 CD8B2A6NJW9 211 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 TEX22C9J3V5 150 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 RRHO14718 337 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 SYF2O95926 243 aaKnown RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 CRYABP02511 175 aaKnown RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 CBSLP0DN79 551 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 HOXB9P17482 250 aaPredicted RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 SLC8A1P32418 973 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 CBSP35520 551 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 STAT1P42224 750 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 POLD2P49005 469 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 OAZ1P54368 228 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 ARF3P61204 181 aaPredicted RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 ARF1P84077 181 aaKnown RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 B4GALNT1Q00973 533 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 EIF4A2Q14240 407 aaKnown RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 TSTQ16762 297 aaKnown RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 ALDH1L2Q3SY69 923 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 RUNDC3AQ59EK9 446 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 MANEAQ5SRI9 462 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 DAB2IPQ5VWQ8 1189 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 HAUS3Q68CZ6 603 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 KYAT3Q6YP21 454 aaKnown RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 SYNE3Q6ZMZ3 975 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 CCDC129Q6ZRS4 1044 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 H1FNTQ75WM6 255 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms