RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 UCMAQ8WVF2 138 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 RAPGEF5Q92565 580 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 FATE1Q969F0 183 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 MAGOHBQ96A72 148 aaKnown RBP7.77□□□□□ -1.17
SDCBP-206ENST00000519115 LMLNQ96KR4 655 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 FERMT1Q9BQL6 677 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 ERP44Q9BS26 406 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 PARD6BQ9BYG5 372 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 FAM126AQ9BYI3 521 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-206ENST00000519115 MAGEB5Q9BZ81 275 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 SLC6A17Q9H1V8 727 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 GDF3Q9NR23 364 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 FAM114A2Q9NRY5 505 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 MPP6Q9NZW5 540 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 BCCIPQ9P287 314 aaKnown RBP eCLIP7.77□□□□□ -1.17
SDCBP-206ENST00000519115 INTS6Q9UL03 887 aaKnown RBP7.77□□□□□ -1.17
SDCBP-206ENST00000519115 INVSQ9Y283 1065 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 UTP11Q9Y3A2 253 aaKnown RBP7.77□□□□□ -1.17
SDCBP-206ENST00000519115 STARD13Q9Y3M8 1113 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 STON1Q9Y6Q2 735 aa7.77□□□□□ -1.17
SDCBP-206ENST00000519115 TNRC6BQ9UPQ9 1833 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 GVINP1Q7Z2Y8 2422 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 CXorf51AA0A1B0GTR3 108 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 A0A1W2PQF6 199 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PRR23AA6NEV1 266 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 WASH4PA8MWX3 477 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 E9PAM4 449 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 H3BRJ5 948 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 DCLK1O15075 740 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 FGF10O15520 208 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 MTSS1O43312 755 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 HRO43593 1189 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 LILRB5O75023 590 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 KRT1P04264 644 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 GABRG2P18507 467 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 POLR2EP19388 210 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 ITIH2P19823 946 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 MZF1P28698 734 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 HOXA6P31267 233 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 CTSOP43234 321 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 SSR1P43307 286 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 MARCKSL1P49006 195 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 CDH6P55285 790 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 DR1Q01658 176 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 BYSLQ13895 437 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 DPYSL3Q14195 570 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PAFAH1B3Q15102 231 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PLEKHG6Q3KR16 790 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 C5orf22Q49AR2 442 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 ANKRD20A8PQ5CZ79 823 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PITRM1Q5JRX3 1037 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 TTC39BQ5VTQ0 682 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 DAB2IPQ5VWQ8 1189 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 DUPD1Q68J44 220 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 SDE2Q6IQ49 451 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 CXorf57Q6NSI4 855 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 C8orf74Q6P047 294 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 SCYL2Q6P3W7 929 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 EMBQ6PCB8 327 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 CCDC137Q6PK04 289 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 LRRC31Q6UY01 552 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 CEP68Q76N32 757 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 ASCL5Q7RTU5 278 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 KIAA0907Q7Z7F0 614 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 WDR5BQ86VZ2 330 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 CCDC50Q8IVM0 306 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 APCDD1Q8J025 514 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PYROXD2Q8N2H3 581 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PGBD3Q8N328 593 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 CAMKK1Q8N5S9 505 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 NOA1Q8NC60 698 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 RLN3Q8WXF3 142 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 RTP4Q96DX8 246 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PSMB7Q99436 277 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 EPAS1Q99814 870 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 LRRC1Q9BTT6 524 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PHACTR1Q9C0D0 580 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 ANKZF1Q9H8Y5 726 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PCDH18Q9HCL0 1135 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 POLMQ9NP87 494 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 GPATCH2LQ9NWQ4 482 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 THAP10Q9P2Z0 257 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 PPARGC1AQ9UBK2 798 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 AP4E1Q9UPM8 1137 aa7.76□□□□□ -1.17
SDCBP-206ENST00000519115 SMG5Q9UPR3 1016 aaKnown RBP7.76□□□□□ -1.17
SDCBP-206ENST00000519115 WDR87Q6ZQQ6 2873 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 IGLV3-10A0A075B6K4 115 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 BCLAF3A2AJT9 711 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 PROB1E7EW31 1015 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 FAM72CH0Y354 149 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 TIMM44O43615 452 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 LIASO43766 372 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 GFRA3O60609 400 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 CST8O60676 142 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 CLDN11O75508 207 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 RPP40O75818 363 aaKnown RBP7.75□□□□□ -1.17
SDCBP-206ENST00000519115 ALDH1A2O94788 518 aa7.75□□□□□ -1.17
SDCBP-206ENST00000519115 LRIG2O94898 1065 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms