RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 HS3ST2Q9Y278 367 aa11.98□□□□□ -0.49
TMEM55A-202ENST00000518359 PCDHB4Q9Y5E5 795 aa11.98□□□□□ -0.49
TMEM55A-202ENST00000518359 SCN8AQ9UQD0 1980 aa11.98□□□□□ -0.49
TMEM55A-202ENST00000518359 PMS2P1A4D2B8 440 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 TMX2-CTNND1H3BSU7 103 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 FPGTO14772 594 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 PLD2O14939 933 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 PPFIA2O75334 1257 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 CTSLP07711 333 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 SRCP12931 536 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 PFKFB1P16118 471 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 JUNDP17535 347 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 BRD2P25440 801 aaKnown RBP11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 SLC5A2P31639 672 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 RECQLP46063 649 aaPredicted RBP11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 NFKB2Q00653 900 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 LRMPQ12912 555 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 PDE1CQ14123 709 aaPredicted RBP11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 PERM1Q5SV97 790 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 SEL1L3Q68CR1 1132 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 JAMLQ86YT9 394 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 FBXO39Q8N4B4 442 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 ATP11CQ8NB49 1132 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 ALG14Q96F25 216 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 FEM1CQ96JP0 617 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 BMFQ96LC9 184 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 PRMT1Q99873 361 aaKnown RBP11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 CCDC3Q9BQI4 270 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 C2orf49Q9BVC5 232 aaPredicted RBP11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 BOCQ9BWV1 1114 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 HDAC8Q9BY41 377 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 STRADBQ9C0K7 418 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 MUC3BQ9H195 1237 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 CAAP1Q9H8G2 361 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 FAM204AQ9H8W3 233 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 SEPT10Q9P0V9 454 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 ANKMY1Q9P2S6 941 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 ACSL6Q9UKU0 697 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 BSNQ9UPA5 3926 aa11.97□□□□□ -0.49
TMEM55A-202ENST00000518359 A0A1B0GVL5 298 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 POM121BA6NF01 834 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 SLC16A3O15427 465 aaKnown RBP11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 EFSO43281 561 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 CLDN11O75508 207 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 IGLV3-25P01717 112 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 FAM87AP0C7U9 286 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 LIPCP11150 499 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 ITGB6P18564 788 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 CCR1P32246 355 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 CLCN6P51797 869 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 NEK3P51956 506 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 YWHAZP63104 245 aaKnown RBP11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 CENPCQ03188 943 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 ESRP1Q6NXG1 681 aaKnown RBP11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 FBXL22Q6P050 247 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 RAB11FIP2Q7L804 512 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 OR2A12Q8NGT7 310 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 GRIN3AQ8TCU5 1115 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 NT5C1BQ96P26 610 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 MED15Q96RN5 788 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 EPB41L5Q9HCM4 733 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 APOBEC3BQ9UH17 382 aaKnown RBP11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 IL36AQ9UHA7 158 aa11.96□□□□□ -0.49
TMEM55A-202ENST00000518359 LRRK2Q5S007 2527 aa11.96□□□□□ -0.5
TMEM55A-202ENST00000518359 PAK4O96013 591 aaPredicted RBP11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 F13A1P00488 732 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 ANXA6P08133 673 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 JMJD7P0C870 316 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 GP1BBP13224 206 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 CMA1P23946 247 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 RPL34P49207 117 aaKnown RBP11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 THOP1P52888 689 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 PDX1P52945 283 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 TLE1Q04724 770 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 SGCGQ13326 291 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 PTK2BQ14289 1009 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 DRAP1Q14919 205 aaPredicted RBP11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 MANEAQ5SRI9 462 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 SLC35F3Q8IY50 421 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 PPM1KQ8N3J5 372 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 TBATAQ96M53 351 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 TSG101Q99816 390 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 ZSWIM1Q9BR11 485 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 THAP9Q9H5L6 903 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 VANGL2Q9ULK5 521 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 PADI4Q9UM07 663 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 TBC1D30Q9Y2I9 924 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 OR51B4Q9Y5P0 310 aa11.95□□□□□ -0.5
TMEM55A-202ENST00000518359 SYNJ2BP-COX16A0A087WUM0 186 aa11.94□□□□□ -0.5
TMEM55A-202ENST00000518359 LMO7DNF2Z398 122 aa11.94□□□□□ -0.5
TMEM55A-202ENST00000518359 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
TMEM55A-202ENST00000518359 M0QYT0 321 aa11.94□□□□□ -0.5
TMEM55A-202ENST00000518359 NTN3O00634 580 aaPredicted RBP11.94□□□□□ -0.5
TMEM55A-202ENST00000518359 NVLO15381 856 aaKnown RBP11.94□□□□□ -0.5
TMEM55A-202ENST00000518359 NOBOXO60393 691 aa11.94□□□□□ -0.5
TMEM55A-202ENST00000518359 RHOCP08134 193 aa11.94□□□□□ -0.5
TMEM55A-202ENST00000518359 ZSCAN22P10073 491 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms