RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 SKIDA1Q1XH10 827 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 KLHL38Q2WGJ6 581 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 DNAJC21Q5F1R6 531 aaKnown RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 BRMS1LQ5PSV4 323 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 TMEM201Q5SNT2 666 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 OTUD1Q5VV17 481 aaPredicted RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 SYPL2Q5VXT5 272 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 BSPRYQ5W0U4 402 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 BTBD8Q5XKL5 378 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 ZNF280DQ6N043 979 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 CDPF1Q6NVV7 123 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 VSTM1Q6UX27 236 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 C6orf15Q6UXA7 325 aaPredicted RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 BHLHA9Q7RTU4 235 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 GPRIN1Q7Z2K8 1008 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 ZNF280BQ86YH2 543 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 HID1Q8IV36 788 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 MCATQ8IVS2 390 aaKnown RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 PALM2Q8IXS6 379 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 ZBED8Q8IZ13 594 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 CNPY4Q8N129 248 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 VPS52Q8N1B4 723 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 ATP11CQ8NB49 1132 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 MCUQ8NE86 351 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 DBF4BQ8NFT6 615 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 OR10T2Q8NGX3 314 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 UHMK1Q8TAS1 419 aaKnown RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 HASPINQ8TF76 798 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 PYROXD1Q8WU10 500 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 RNF139Q8WU17 664 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 C2orf15Q8WU43 125 aaKnown RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 FBLIM1Q8WUP2 373 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 NDRG1Q92597 394 aaKnown RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 LRRC39Q96DD0 335 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 C8orf48Q96LL4 319 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 OLFM3Q96PB7 478 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 QKIQ96PU8 341 aaKnown RBP eCLIP6.02□□□□□ -1.452e-6■■■■■ 80.9
CD47-205ENST00000517766 UBL7Q96S82 380 aaPredicted RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 TM9SF2Q99805 663 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 BRD8Q9H0E9 1235 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 EPN3Q9H201 632 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 FBXO44Q9H4M3 255 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 WDR6Q9NNW5 1121 aaKnown RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 ARHGEF4Q9NR80 690 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 TMLHEQ9NVH6 421 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 DNAJC17Q9NVM6 304 aaKnown RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 DDIT4Q9NX09 232 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.02□□□□□ -1.45
CD47-205ENST00000517766 SENP1Q9P0U3 644 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 LGALS13Q9UHV8 139 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 SLC12A6Q9UHW9 1150 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 XPO7Q9UIA9 1087 aaKnown RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 FBXW11Q9UKB1 542 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 ADAM28Q9UKQ2 775 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 ZMYND8Q9ULU4 1186 aaPredicted RBP6.02□□□□□ -1.45
CD47-205ENST00000517766 NUP205Q92621 2012 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 TET1Q8NFU7 2136 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 LTBP2Q14767 1821 aa6.02□□□□□ -1.45
CD47-205ENST00000517766 SYNJ2BP-COX16A0A087WUM0 186 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ERICH4A6NGS2 130 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SMIM23A6NLE4 172 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 H7C4K7 107 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 DCLK1O15075 740 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 MTSS1O43312 755 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 CREB3O43889 395 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 TMEM63AO94886 807 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 IGLV3-25P01717 112 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 CXCL10P02778 98 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ITGB1P05556 798 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 NOS3P29474 1203 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 LSP1P33241 339 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SLC5A3P53794 718 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 CACNA2D1P54289 1103 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 TPI1P60174 286 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 YWHAGP61981 247 aaKnown RBP eCLIP6.01□□□□□ -1.45
CD47-205ENST00000517766 COG7P83436 770 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 CDK16Q00536 496 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 GUCY1A3Q02108 690 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 GBE1Q04446 702 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ZNF33AQ06730 810 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SEMA3BQ13214 749 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 MTA1Q13330 715 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 DPYSQ14117 519 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SLBPQ14493 270 aaKnown RBP eCLIP6.01□□□□□ -1.45
CD47-205ENST00000517766 DDR2Q16832 855 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 CCDC38Q502W7 563 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SLC39A12Q504Y0 691 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ACBD5Q5T8D3 534 aaPredicted RBP6.01□□□□□ -1.45
CD47-205ENST00000517766 PRAMEF13Q5VWM6 474 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ANKRD22Q5VYY1 191 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 KCNT2Q6UVM3 1135 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 LRRC31Q6UY01 552 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ARHGEF18Q6ZSZ5 1173 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 RFX8Q6ZV50 586 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ANKRD33Q7Z3H0 272 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 TADA2BQ86TJ2 420 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 TAC4Q86UU9 113 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 LRRTM3Q86VH5 581 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 EXOC3L1Q86VI1 746 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SPATS2Q86XZ4 545 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms