RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 PRCCQ92733 491 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MAGOHBQ96A72 148 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HDAC11Q96DB2 347 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RUNDC3BQ96NL0 473 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 VAT1Q99536 393 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OMDQ99983 421 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HEPHQ9BQS7 1158 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TUBB2BQ9BVA1 445 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 COL25A1Q9BXS0 654 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ACE2Q9BYF1 805 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 POLR1EQ9GZS1 481 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EPHX3Q9H6B9 360 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZDHHC6Q9H6R6 413 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LRRC19Q9H756 370 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NT5MQ9NPB1 228 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SCUBE2Q9NQ36 999 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NDFIP2Q9NV92 336 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ETNK2Q9NVF9 386 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DTLQ9NZJ0 730 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KLHL8Q9P2G9 620 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 AMACRQ9UHK6 382 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TRHDEQ9UKU6 1024 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MMP17Q9ULZ9 603 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MTF2Q9Y483 593 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TICRRQ7Z2Z1 1910 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DOCK8Q8NF50 2099 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 A0A1W2PQ67 120 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TCRBV21S2A2A0A5A6 115 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FAM86C2PA6NEL3 165 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PRR33A8MZF0 331 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CHURC1-FNTBB4DL54 471 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 J3KR12 359 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KCNK1O00180 336 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KPNA3O00505 521 aaPredicted RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NEMP1O14524 444 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ALOX15BO15296 676 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KCNN4O15554 427 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PSMD3O43242 534 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ATP9BO43861 1147 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NDUFS2O75306 463 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TMCC1O94876 653 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GAS8O95995 478 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ADH1BP00325 375 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GSRP00390 522 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PDGFBP01127 241 aaPredicted RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IFNB1P01574 187 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 JCHAINP01591 159 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SERPINF2P08697 491 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HLA-EP13747 358 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GLDCP23378 1020 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SERPINA4P29622 427 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 STIP1P31948 543 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IL12RB1P42701 662 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PSMD8P48556 350 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SCNN1BP51168 640 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EPHB1P54762 984 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 POLR2LP62875 67 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CSTF1Q05048 431 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 BCL2L1Q07817 233 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PPIDQ08752 370 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCINQ13939 588 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ELAVL3Q14576 367 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NOMO1Q15155 1222 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PPP1R7Q15435 360 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCNG2Q16589 344 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TAZQ16635 292 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 USP39Q53GS9 565 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SLC45A4Q5BKX6 768 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RALGPS1Q5JS13 557 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PAPD7Q5XG87 772 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZNF776Q68DI1 518 aaPredicted RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RNF43Q68DV7 783 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 AADACL2Q6P093 401 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C22orf39Q6P5X5 142 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C4orf22Q6V702 233 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 Q6ZVU0 165 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SYT13Q7L8C5 426 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 BMP8AQ7Z5Y6 402 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SRLQ86TD4 932 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PHTF2Q8N3S3 785 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CAMKK1Q8N5S9 505 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NPWQ8N729 165 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZNF366Q8N895 744 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IL17RCQ8NAC3 791 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DTWD2Q8NBA8 298 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NETO2Q8NC67 525 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OR2AP1Q8NGE2 309 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OR2T3Q8NH03 318 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ACTRT1Q8TDG2 376 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PDCD6IPQ8WUM4 868 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HMGB4Q8WW32 186 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C1orf54Q8WWF1 131 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HTR3CQ8WXA8 447 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ISG20Q96AZ6 181 aaKnown RBP5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CLDN23Q96B33 292 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ERLEC1Q96DZ1 483 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ALG14Q96F25 216 aa5.54□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SIPA1Q96FS4 1042 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms