RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 IL22Q9GZX6 179 aa12.17□□□□□ -0.46
LMNA-224ENST00000515711 SLC25A51Q9H1U9 297 aa12.17□□□□□ -0.46
LMNA-224ENST00000515711 TRPC7Q9HCX4 862 aa12.17□□□□□ -0.46
LMNA-224ENST00000515711 SSU72Q9NP77 194 aaKnown RBP12.17□□□□□ -0.46
LMNA-224ENST00000515711 RBM22Q9NW64 420 aaKnown RBP eCLIP12.17□□□□□ -0.46
LMNA-224ENST00000515711 CTNNAL1Q9UBT7 734 aa12.17□□□□□ -0.46
LMNA-224ENST00000515711 ZMYM5Q9UJ78 669 aa12.17□□□□□ -0.46
LMNA-224ENST00000515711 AGO1Q9UL18 857 aaKnown RBP12.17□□□□□ -0.46
LMNA-224ENST00000515711 ATG2AQ2TAZ0 1938 aa12.17□□□□□ -0.46
LMNA-224ENST00000515711 CHD9Q3L8U1 2897 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 ILVBLA1L0T0 632 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 LCHNA4D1U4 455 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 PRAMEF11O60813 436 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 ALDH1A2O94788 518 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 HLA-DQB2P05538 268 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 RHOCP08134 193 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 HNRNPA1P09651 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
LMNA-224ENST00000515711 IRF1P10914 325 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 KRT15P19012 456 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 HDCP19113 662 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 CNTFP26441 200 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 MGAT1P26572 445 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 SERPINB9P50453 376 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 IRAK1P51617 712 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 CLCN4P51793 760 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 SLC18A1P54219 525 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 SESN2P58004 480 aaPredicted RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 ERVFC1P60507 584 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 GNA12Q03113 381 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 ZNF177Q13360 481 aaPredicted RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 RFTN1Q14699 578 aaPredicted RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 SKIV2LQ15477 1246 aaKnown RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 SLC14A2Q15849 920 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 TRABD2AQ86V40 505 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 SLC26A11Q86WA9 606 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 LRRC6Q86X45 466 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 ARL14EPQ8N8R7 260 aaPredicted RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 HJURPQ8NCD3 748 aaPredicted RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 USP33Q8TEY7 942 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 PTCD2Q8WV60 388 aaKnown RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 DCAKDQ8WVC6 231 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 TTC17Q96AE7 1141 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 ALKBH8Q96BT7 664 aaKnown RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 MTBPQ96DY7 904 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 ZFRQ96KR1 1074 aaKnown RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 PRICKLE1Q96MT3 831 aaPredicted RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 TBL1YQ9BQ87 522 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 FSD1LQ9BXM9 530 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 LRRC3Q9BY71 257 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 RNF38Q9H0F5 515 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 TBK1Q9UHD2 729 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 SMG5Q9UPR3 1016 aaKnown RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 CPQQ9Y646 472 aa12.16□□□□□ -0.46
LMNA-224ENST00000515711 ZFP37Q9Y6Q3 630 aaPredicted RBP12.16□□□□□ -0.46
LMNA-224ENST00000515711 GOLGA6L7A0A1B0GV03 622 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 FAM159BA6NKW6 160 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 F5H423 210 aaPredicted RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 PRPF4O43172 522 aaKnown RBP eCLIP12.15□□□□□ -0.46
LMNA-224ENST00000515711 XYLBO75191 536 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 USP1O94782 785 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 PEX11BO96011 259 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 KLKB1P03952 638 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 CKMP06732 381 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 BRAFP15056 766 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 GRIA1P42261 906 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 EPHA5P54756 1037 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 MTM1Q13496 603 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 ZNF235Q14590 738 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 LBRQ14739 615 aaKnown RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 CRYMQ14894 314 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 EFTUD2Q15029 972 aaKnown RBP eCLIP12.15□□□□□ -0.46
LMNA-224ENST00000515711 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 KBTBD12Q3ZCT8 623 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 ARHGAP15Q53QZ3 475 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 RFWD3Q6PCD5 774 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 Q6ZNB5 142 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 GAREM2Q75VX8 874 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 MARK2Q7KZI7 788 aaKnown RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 CIR1Q86X95 450 aaPredicted RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 SRRM1Q8IYB3 904 aaKnown RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 MPP5Q8N3R9 675 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 OR52K1Q8NGK4 314 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 PABPC5Q96DU9 382 aaKnown RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 OXNAD1Q96HP4 312 aaPredicted RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 SGSM3Q96HU1 749 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 SMC6Q96SB8 1091 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 MRM3Q9HC36 420 aaKnown RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 ALG13Q9NP73 1137 aaKnown RBP12.15□□□□□ -0.46
LMNA-224ENST00000515711 SYBUQ9NX95 663 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 NKIRAS1Q9NYS0 192 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 SOX13Q9UN79 622 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 TBC1D30Q9Y2I9 924 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 SH3BP1Q9Y3L3 701 aa12.15□□□□□ -0.46
LMNA-224ENST00000515711 FAM237BA0A1B0GVD1 139 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 H3BNC9 293 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 KRT37O76014 449 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 SPATA31D3P0C874 917 aa12.14□□□□□ -0.47
LMNA-224ENST00000515711 CHN1P15882 459 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms