RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 IL1R2P27930 398 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 L1CAMP32004 1257 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 EIF4A3P38919 411 aaKnown RBP11.73□□□□□ -0.53
VCAN-212ENST00000515397 DPP6P42658 865 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 SERPINH1P50454 418 aaKnown RBP11.73□□□□□ -0.53
VCAN-212ENST00000515397 VASPP50552 380 aaPredicted RBP11.73□□□□□ -0.53
VCAN-212ENST00000515397 ADPRHP54922 357 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 FAM193AP78312 1265 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 FOXK2Q01167 660 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 SCAPQ12770 1279 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 KIF19Q2TAC6 998 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 CCDC122Q5T0U0 273 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 ATXN7L2Q5T6C5 722 aaPredicted RBP11.73□□□□□ -0.53
VCAN-212ENST00000515397 ACBD5Q5T8D3 534 aaPredicted RBP11.73□□□□□ -0.53
VCAN-212ENST00000515397 CPNE8Q86YQ8 564 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 RYBPQ8N488 228 aaPredicted RBP11.73□□□□□ -0.53
VCAN-212ENST00000515397 OR2T34Q8NGX1 318 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 HMCESQ96FZ2 354 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 SNRNP25Q9BV90 132 aaKnown RBP11.73□□□□□ -0.53
VCAN-212ENST00000515397 ISCUQ9H1K1 167 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 TMEM51Q9NW97 253 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 ARHGAP20Q9P2F6 1191 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 SUSD2Q9UGT4 822 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 SCML1Q9UN30 329 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 AP4E1Q9UPM8 1137 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 CA5BQ9Y2D0 317 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 SNX11Q9Y5W9 270 aa11.73□□□□□ -0.53
VCAN-212ENST00000515397 PCNX2A6NKB5 2137 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 CHD8Q9HCK8 2581 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 SPAARA0A1B0GVQ0 90 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 RASA4BC9J798 803 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 RASA4O43374 803 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 SH3BP5O60239 455 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 TOP3BO95985 862 aaKnown RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 WNT1P04628 370 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 CD59P13987 128 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 RECQLP46063 649 aaPredicted RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 MAPKAPK2P49137 400 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 ADKP55263 362 aaKnown RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 TAS2R38P59533 333 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 IL9RQ01113 521 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 SEMA3BQ13214 749 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 SMTNL2Q2TAL5 461 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 HLA-BQ31612 363 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 CARD16Q5EG05 197 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 PPP6R3Q5H9R7 873 aaPredicted RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 ERMARDQ5T6L9 678 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 AGBL4Q5VU57 503 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 FAM46CQ5VWP2 391 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 TXNRD3NBQ6F5E7 133 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 RETSATQ6NUM9 610 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 ZNF783Q6ZMS7 281 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 CYP4V2Q6ZWL3 525 aaPredicted RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 RABEPKQ7Z6M1 372 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 DSG4Q86SJ6 1040 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 TP53INP2Q8IXH6 220 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 RTL3Q8N8U3 475 aaKnown RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 SYN2Q92777 582 aaPredicted RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 EPAS1Q99814 870 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 MYOCQ99972 504 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 MAGEH1Q9H213 219 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 ZDHHC6Q9H6R6 413 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 GAREM1Q9H706 876 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 CAAP1Q9H8G2 361 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 ZWILCHQ9H900 591 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 AASDHPPTQ9NRN7 309 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 HECAQ9UBI9 543 aaPredicted RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 ANKRD6Q9Y2G4 727 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 FNDC3AQ9Y2H6 1198 aaKnown RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 MFHAS1Q9Y4C4 1052 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
VCAN-212ENST00000515397 WASF2Q9Y6W5 498 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 DOCK4Q8N1I0 1966 aa11.72□□□□□ -0.53
VCAN-212ENST00000515397 A0A1W2PPC4 97 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 C1QTNF3-AMACRE9PGA6 284 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 J3KR12 359 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 EEF2KO00418 725 aaKnown RBP11.71□□□□□ -0.53
VCAN-212ENST00000515397 SLC31A1O15431 190 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 DAPK3O43293 454 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 KDELR3O43731 214 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 PRPSAP2O60256 369 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 LRCH4O75427 683 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 RNF8O76064 485 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 PRLRP16471 622 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 SPINK2P20155 84 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 SSR1P43307 286 aaKnown RBP11.71□□□□□ -0.53
VCAN-212ENST00000515397 AFF3P51826 1226 aaKnown RBP11.71□□□□□ -0.53
VCAN-212ENST00000515397 CCNHP51946 323 aaPredicted RBP11.71□□□□□ -0.53
VCAN-212ENST00000515397 TPI1P60174 286 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 SLC20A2Q08357 652 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 SFSWAPQ12872 951 aaKnown RBP11.71□□□□□ -0.53
VCAN-212ENST00000515397 PIP5KL1Q5T9C9 394 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 PPP1R2P3Q6NXS1 205 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 ALKBH5Q6P6C2 394 aaKnown RBP11.71□□□□□ -0.53
VCAN-212ENST00000515397 ADAT2Q7Z6V5 191 aaKnown RBP11.71□□□□□ -0.53
VCAN-212ENST00000515397 HSPH1Q92598 858 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 SERAC1Q96JX3 654 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 CHP1Q99653 195 aa11.71□□□□□ -0.53
VCAN-212ENST00000515397 NUP85Q9BW27 656 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms