RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 MRGPRX3Q96LB0 322 aa16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 QKIQ96PU8 341 aaKnown RBP eCLIP16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 LGMNQ99538 433 aa16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 HERPUD2Q9BSE4 406 aa16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 FBRSQ9HAH7 460 aa16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 PDFQ9HBH1 243 aa16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 POLMQ9NP87 494 aaPredicted RBP16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 SEPT10Q9P0V9 454 aa16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 SLCO3A1Q9UIG8 710 aa16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 MMP17Q9ULZ9 603 aa16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 NYNRINQ9P2P1 1898 aaKnown RBP16.03■□□□□ 0.16
SH3TC1-223ENST00000513495 SHROOM3Q8TF72 1996 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 TECTAO75443 2155 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 TARSL2A2RTX5 802 aaKnown RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 CFAP69A5D8W1 941 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 TTC34A8MYJ7 566 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 RNASEH1O60930 286 aaKnown RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 TMCC1O94876 653 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 IGSF6O95976 241 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 PDGFBP01127 241 aaPredicted RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 DCNP07585 359 aaKnown RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 CCNB1P14635 433 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 IL12RB1P42701 662 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 WASP42768 502 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 MMP13P45452 471 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 SNRPD1P62314 119 aaKnown RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 RAD51Q06609 339 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 HNRNPDQ14103 355 aaKnown RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 HNRNPA1L2Q32P51 320 aaKnown RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 CWF19L1Q69YN2 538 aaKnown RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 C22orf39Q6P5X5 142 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 ARHGAP36Q6ZRI8 547 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 Q6ZS52 159 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 TP53INP2Q8IXH6 220 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 RYBPQ8N488 228 aaPredicted RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 FBXL6Q8N531 539 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 COG1Q8WTW3 980 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 GDAP1L1Q96MZ0 367 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 TMEM245Q9H330 911 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 AMACRQ9UHK6 382 aa16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.16
SH3TC1-223ENST00000513495 UNC80Q8N2C7 3258 aa16.02■□□□□ 0.15
SH3TC1-223ENST00000513495 TCRBV7S2A1N4TA0A589 114 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 ESPNB1AK53 854 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 KRIT1O00522 736 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 BNIP3LO60238 219 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 ALDH1A2O94788 518 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 MT-CO1P00395 513 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 MAPK8P45983 427 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 CCR3P51677 355 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 DGKEP52429 567 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 FZD5Q13467 585 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 ENPP2Q13822 863 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 TUBB2AQ13885 445 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 BYSLQ13895 437 aaKnown RBP16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 CCNG2Q16589 344 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 SYT13Q7L8C5 426 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 HTR3CQ8WXA8 447 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 OR8D1Q8WZ84 308 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 MS4A14Q96JA4 679 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 ACOX2Q99424 681 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 VAT1Q99536 393 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 GABRG3Q99928 467 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 TUBB2BQ9BVA1 445 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 C1QTNF1Q9BXJ1 281 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 EPHX3Q9H6B9 360 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 ZDHHC4Q9NPG8 344 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 ZNF148Q9UQR1 794 aa16.01■□□□□ 0.15
SH3TC1-223ENST00000513495 MYO18AQ92614 2054 aaKnown RBP16■□□□□ 0.15
SH3TC1-223ENST00000513495 ATG2BQ96BY7 2078 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 K7ERQ8 282 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 SGK1O00141 431 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 DLL1O00548 723 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 ZNF185O15231 689 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 SMAD6O43541 496 aaKnown RBP16■□□□□ 0.15
SH3TC1-223ENST00000513495 URI1O94763 535 aaPredicted RBP16■□□□□ 0.15
SH3TC1-223ENST00000513495 GSRP00390 522 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 HLA-EP13747 358 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 PRKCHP24723 683 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 ACTN2P35609 894 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 IFI35P80217 286 aaPredicted RBP16■□□□□ 0.15
SH3TC1-223ENST00000513495 LMNB2Q03252 620 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 CKAP4Q07065 602 aaKnown RBP16■□□□□ 0.15
SH3TC1-223ENST00000513495 ITKQ08881 620 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 SLC10A7Q0GE19 358 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 ELAVL3Q14576 367 aaKnown RBP16■□□□□ 0.15
SH3TC1-223ENST00000513495 CARD16Q5EG05 197 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 DNTTIP2Q5QJE6 756 aaKnown RBP16■□□□□ 0.15
SH3TC1-223ENST00000513495 C1orf54Q8WWF1 131 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 MAML1Q92585 1016 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 PSKH2Q96QS6 385 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 FAM118BQ9BPY3 351 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 RBM22Q9NW64 420 aaKnown RBP eCLIP16■□□□□ 0.15
SH3TC1-223ENST00000513495 SPATA6Q9NWH7 488 aaPredicted RBP16■□□□□ 0.15
SH3TC1-223ENST00000513495 TTLL3Q9Y4R7 772 aa16■□□□□ 0.15
SH3TC1-223ENST00000513495 BCLAF3A2AJT9 711 aaKnown RBP15.99■□□□□ 0.15
SH3TC1-223ENST00000513495 WASH3PC4AMC7 463 aa15.99■□□□□ 0.15
SH3TC1-223ENST00000513495 KCNK1O00180 336 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms