RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TRIM62Q9BVG3 475 aa16.29■□□□□ 0.2
RAB40C-202ENST00000509637 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
RAB40C-202ENST00000509637 PNMA8BQ9ULN7 279 aaPredicted RBP16.29■□□□□ 0.2
RAB40C-202ENST00000509637 TPX2Q9ULW0 747 aaKnown RBP16.29■□□□□ 0.2
RAB40C-202ENST00000509637 KIF26BQ2KJY2 2108 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 HELZ2Q9BYK8 2649 aaKnown RBP16.28■□□□□ 0.2
RAB40C-202ENST00000509637 IGLV3-10A0A075B6K4 115 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 PMS2P1A4D2B8 440 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 C1QTNF3-AMACRE9PGA6 284 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 KPNA3O00505 521 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-202ENST00000509637 SPINT1O43278 529 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 OPA1O60313 960 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 ZNF18P17022 549 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 GKP32189 559 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 OXCT1P55809 520 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 RNASE9P60153 205 aaKnown RBP16.28■□□□□ 0.2
RAB40C-202ENST00000509637 FZD2Q14332 565 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 TBC1D25Q3MII6 688 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 DSG4Q86SJ6 1040 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 ATP11CQ8NB49 1132 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 APOLD1Q96LR9 279 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 FCRL3Q96P31 734 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-202ENST00000509637 KLF6Q99612 283 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-202ENST00000509637 MUC3BQ9H195 1237 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 GGT7Q9UJ14 662 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 RP1P56715 2156 aa16.28■□□□□ 0.2
RAB40C-202ENST00000509637 LEFTY1O75610 366 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 MPOP05164 745 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 RHOCP08134 193 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 CKMT1AP12532 417 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 NUDT1P36639 197 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 FLT3P36888 993 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 ARF5P84085 180 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 EXOC3L4Q17RC7 722 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 C22orf39Q6P5X5 142 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 GBP6Q6ZN66 633 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 Q6ZSR6 202 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 ERN2Q76MJ5 926 aaKnown RBP16.27■□□□□ 0.2
RAB40C-202ENST00000509637 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 FAM71AQ8IYT1 594 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 GRIN3AQ8TCU5 1115 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 PGAP3Q96FM1 320 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-202ENST00000509637 NAF1Q96HR8 494 aaKnown RBP16.27■□□□□ 0.2
RAB40C-202ENST00000509637 HIC2Q96JB3 615 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 CALN1Q9BXU9 219 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 WDCPQ9H6R7 721 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 NDFIP2Q9NV92 336 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 RWDD2AQ9UIY3 292 aa16.27■□□□□ 0.2
RAB40C-202ENST00000509637 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.2
RAB40C-202ENST00000509637 K7ESM1 405 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 PAK4O96013 591 aaPredicted RBP16.26■□□□□ 0.19
RAB40C-202ENST00000509637 HNRNPA2B1P22626 353 aaKnown RBP16.26■□□□□ 0.19
RAB40C-202ENST00000509637 CDH5P33151 784 aaPredicted RBP16.26■□□□□ 0.19
RAB40C-202ENST00000509637 ABL2P42684 1182 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 GABRB2P47870 512 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 SULT1E1P49888 294 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 MIIPQ5JXC2 388 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 NEK5Q6P3R8 708 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 XYLT1Q86Y38 959 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 ZNF843Q8N446 348 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 DCAF4L2Q8NA75 395 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 HDAC8Q9BY41 377 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 OSBPL2Q9H1P3 480 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 TCEAL2Q9H3H9 227 aaPredicted RBP16.26■□□□□ 0.19
RAB40C-202ENST00000509637 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.26■□□□□ 0.19
RAB40C-202ENST00000509637 TMEM59LQ9UK28 342 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 FADS3Q9Y5Q0 445 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 CHD5Q8TDI0 1954 aa16.26■□□□□ 0.19
RAB40C-202ENST00000509637 MAGEC1O60732 1142 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 PCDH8O95206 1070 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 ACVRL1P37023 503 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 E2F1Q01094 437 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 PTK2Q05397 1052 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 CAMK4Q16566 473 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 BRMS1LQ5PSV4 323 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 NYAP1Q6ZVC0 841 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 PRR11Q96HE9 360 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-202ENST00000509637 SEMA4CQ9C0C4 833 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 ASCL3Q9NQ33 180 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 IL36AQ9UHA7 158 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 ITM2BQ9Y287 266 aa16.25■□□□□ 0.19
RAB40C-202ENST00000509637 FCF1Q9Y324 198 aaKnown RBP16.25■□□□□ 0.19
RAB40C-202ENST00000509637 GTPBP10A4D1E9 387 aaKnown RBP16.24■□□□□ 0.19
RAB40C-202ENST00000509637 SCAMP1O15126 338 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 ITIH2P19823 946 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 TGM2P21980 687 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 KRT83P78385 493 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 DAB2P98082 770 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 DEUP1Q05D60 604 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 EIF2B5Q13144 721 aaKnown RBP16.24■□□□□ 0.19
RAB40C-202ENST00000509637 DRAP1Q14919 205 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-202ENST00000509637 LRRC69Q6ZNQ3 347 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 PARS2Q7L3T8 475 aaKnown RBP16.24■□□□□ 0.19
RAB40C-202ENST00000509637 SETD3Q86TU7 594 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-202ENST00000509637 NETO2Q8NC67 525 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 C1orf74Q96LT6 269 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 SPON2Q9BUD6 331 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 SLC17A9Q9BYT1 436 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 CPNE5Q9HCH3 593 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 KIAA1468Q9P260 1216 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms