RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 SHROOM3Q8TF72 1996 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 ANKRD36A6QL64 1941 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 NCOR2Q9Y618 2525 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 FGF10O15520 208 aaPredicted RBP18.53■□□□□ 0.56
CLDND1-220ENST00000508902 KDELR3O43731 214 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 PROSCO94903 275 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 SEMA4FO95754 770 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 TPM1P09493 284 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 OXTRP30559 389 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 NNMTP40261 264 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 TAS2R38P59533 333 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 BNC1Q01954 994 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 RSPO4Q2I0M5 234 aaPredicted RBP18.53■□□□□ 0.56
CLDND1-220ENST00000508902 AGBL4Q5VU57 503 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 POLNQ7Z5Q5 900 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 HDDC3Q8N4P3 179 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 CADM4Q8NFZ8 388 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 FAM71BQ8TC56 605 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 CTNNBL1Q8WYA6 563 aaPredicted RBP18.53■□□□□ 0.56
CLDND1-220ENST00000508902 OR8D1Q8WZ84 308 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 HSPH1Q92598 858 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 CCDC42Q96M95 316 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 CSPG4P5Q96PW8 444 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 TM6SF2Q9BZW4 377 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 CAPN10Q9HC96 672 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 KLHL11Q9NVR0 708 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 ZNHIT6Q9NWK9 470 aaKnown RBP18.53■□□□□ 0.56
CLDND1-220ENST00000508902 DLL3Q9NYJ7 618 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 UVRAGQ9P2Y5 699 aa18.53■□□□□ 0.56
CLDND1-220ENST00000508902 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.52■□□□□ 0.56
CLDND1-220ENST00000508902 J3KR12 359 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 ALOX15BO15296 676 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 NDUFS2O75306 463 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 RNASEH2AO75792 299 aaKnown RBP18.52■□□□□ 0.56
CLDND1-220ENST00000508902 MTA2O94776 668 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 ADH1BP00325 375 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 C5AR1P21730 350 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 AMPD1P23109 780 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 CHRNA3P32297 505 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 HTR7P34969 479 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 ADPRHP54922 357 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 PPP2CBP62714 309 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 PPP2CAP67775 309 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 LMNB2Q03252 620 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 CNTN1Q12860 1018 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 MMRN1Q13201 1228 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 TTC31Q49AM3 519 aaPredicted RBP18.52■□□□□ 0.56
CLDND1-220ENST00000508902 TRIM61Q5EBN2 209 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 PIP5KL1Q5T9C9 394 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 NCEH1Q6PIU2 408 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 TMEM139Q8IV31 216 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 GPR161Q8N6U8 529 aaKnown RBP18.52■□□□□ 0.56
CLDND1-220ENST00000508902 OR6K2Q8NGY2 324 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 SLC35G2Q8TBE7 412 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 TEKT4Q8WW24 435 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 BIRC7Q96CA5 298 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 CEP44Q9C0F1 390 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 BTBD1Q9H0C5 482 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 CATSPERBQ9H7T0 1116 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 LHX3Q9UBR4 397 aa18.52■□□□□ 0.56
CLDND1-220ENST00000508902 EVLQ9UI08 416 aaPredicted RBP18.52■□□□□ 0.56
CLDND1-220ENST00000508902 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.52■□□□□ 0.56
CLDND1-220ENST00000508902 REXO2Q9Y3B8 237 aaKnown RBP18.52■□□□□ 0.56
CLDND1-220ENST00000508902 SOWAHDA6NJG2 315 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 EIF3CLB5ME19 914 aaKnown RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 MYO1FO00160 1098 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 CDX4O14627 284 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 TMCC1O94876 653 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 LCA5LO95447 670 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 HCAR3P49019 387 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 CCNHP51946 323 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 YBEYP58557 167 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 CYTH1Q15438 398 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 ATXN7L2Q5T6C5 722 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 RETSATQ6NUM9 610 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 SLC23A3Q6PIS1 610 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 ZCCHC9Q8N567 271 aaKnown RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 PCDH20Q8N6Y1 951 aaKnown RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 OR2I1PQ8NGU4 316 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 GRIN3AQ8TCU5 1115 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 NSMCE3Q96MG7 304 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 EIF3CQ99613 913 aaKnown RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 SGK2Q9HBY8 427 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 EIF2B4Q9UI10 523 aaKnown RBP18.51■□□□□ 0.55
CLDND1-220ENST00000508902 FZD4Q9ULV1 537 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 SCML1Q9UN30 329 aa18.51■□□□□ 0.55
CLDND1-220ENST00000508902 CXorf51AA0A1B0GTR3 108 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 RCCD1A6NED2 376 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 WNT9AO14904 365 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 RNASEH1O60930 286 aaKnown RBP18.5■□□□□ 0.55
CLDND1-220ENST00000508902 LEFTY1O75610 366 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 ETFBP38117 255 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 RGRP47804 291 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 PAPOLAP51003 745 aaKnown RBP18.5■□□□□ 0.55
CLDND1-220ENST00000508902 SLC20A2Q08357 652 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 PARP15Q460N3 678 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 AASDHQ4L235 1098 aaPredicted RBP18.5■□□□□ 0.55
CLDND1-220ENST00000508902 BOLA3Q53S33 107 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 CARD16Q5EG05 197 aa18.5■□□□□ 0.55
CLDND1-220ENST00000508902 ARSIQ5FYB1 569 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms