RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 FAM118BQ9BPY3 351 aa10.54□□□□□ -0.72
PTPN20-220ENST00000508715 TRPM6Q9BX84 2022 aa10.54□□□□□ -0.72
PTPN20-220ENST00000508715 C10orf88Q9H8K7 445 aa10.54□□□□□ -0.72
PTPN20-220ENST00000508715 SPATA6Q9NWH7 488 aaPredicted RBP10.54□□□□□ -0.72
PTPN20-220ENST00000508715 PLA2G4CQ9UP65 541 aa10.54□□□□□ -0.72
PTPN20-220ENST00000508715 EFR3BQ9Y2G0 817 aa10.54□□□□□ -0.72
PTPN20-220ENST00000508715 R3HDM2Q9Y2K5 976 aaKnown RBP10.54□□□□□ -0.72
PTPN20-220ENST00000508715 HEY1Q9Y5J3 304 aa10.54□□□□□ -0.72
PTPN20-220ENST00000508715 TNRC6BQ9UPQ9 1833 aaKnown RBP10.54□□□□□ -0.72
PTPN20-220ENST00000508715 APOC4-APOC2K7ER74 178 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 KCNK3O14649 394 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 NPC1O15118 1278 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 TMCC1O94876 653 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 APOC2P02655 101 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 EPHX1P07099 455 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 CTSLP07711 333 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 SERPINB6P35237 376 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 CXCL12P48061 93 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 PXNP49023 591 aaPredicted RBP10.53□□□□□ -0.72
PTPN20-220ENST00000508715 SLC20A2Q08357 652 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 TFDP2Q14188 446 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 EOGTQ5NDL2 527 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 ATXN7L2Q5T6C5 722 aaPredicted RBP10.53□□□□□ -0.72
PTPN20-220ENST00000508715 RASSF3Q86WH2 238 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 STK40Q8N2I9 435 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 ATP11CQ8NB49 1132 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 MDGA1Q8NFP4 955 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 ACTL9Q8TC94 416 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 COG1Q8WTW3 980 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 MAML1Q92585 1016 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 HDAC11Q96DB2 347 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 IER2Q9BTL4 223 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 CARD9Q9H257 536 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 TNKS2Q9H2K2 1166 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 PRDM16Q9HAZ2 1276 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 EBF1Q9UH73 591 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 SLC25A13Q9UJS0 675 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 SARDHQ9UL12 918 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 ZKSCAN5Q9Y2L8 839 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 JRKLQ9Y4A0 524 aa10.53□□□□□ -0.72
PTPN20-220ENST00000508715 EDDM13A0A1B0GTR0 161 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 TTC24A2A3L6 582 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 GOLGA6L9A6NEM1 432 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 INSIG1O15503 277 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 KIF5CO60282 957 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 ATG13O75143 517 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 NDUFV2P19404 249 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 CR2P20023 1033 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 TGM2P21980 687 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 CCNCP24863 283 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 GKP32189 559 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 CLCN6P51797 869 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 NRLP54845 237 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 GNG11P61952 73 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 OTUD4Q01804 1114 aaKnown RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 PPIDQ08752 370 aaKnown RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 ZBTB17Q13105 803 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 PRKD1Q15139 912 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 NOMO1Q15155 1222 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 INO80DQ53TQ3 878 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 RETSATQ6NUM9 610 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 DPY19L3Q6ZPD9 716 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 NYAP1Q6ZVC0 841 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 TRMT11Q7Z4G4 463 aaKnown RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 ZNF354CQ86Y25 554 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 SLC13A5Q86YT5 568 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 RASGEF1CQ8N431 466 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 ATPAF2Q8N5M1 289 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 TEX26Q8N6G2 289 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 CNTD1Q8N815 330 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 FRMD1Q8N878 549 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 TSEN2Q8NCE0 465 aaKnown RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 PRSS33Q8NF86 280 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 CCDC26Q8TAB7 109 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 UBE2Q2Q8WVN8 375 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 FATE1Q969F0 183 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 ISG20Q96AZ6 181 aaKnown RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 MS4A14Q96JA4 679 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 MRGPRX1Q96LB2 322 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 MAK16Q9BXY0 300 aaKnown RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 TM6SF2Q9BZW4 377 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 RSPH9Q9H1X1 276 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 SP110Q9HB58 689 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 DONSONQ9NYP3 566 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 SMARCAL1Q9NZC9 954 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 UBA2Q9UBT2 640 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-220ENST00000508715 WASF2Q9Y6W5 498 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 OTOGLQ3ZCN5 2332 aa10.52□□□□□ -0.73
PTPN20-220ENST00000508715 VPS13AQ96RL7 3174 aa10.51□□□□□ -0.73
PTPN20-220ENST00000508715 MYO15AQ9UKN7 3530 aa10.51□□□□□ -0.73
PTPN20-220ENST00000508715 TCRBV21S2A2A0A5A6 115 aa10.51□□□□□ -0.73
PTPN20-220ENST00000508715 TARSL2A2RTX5 802 aaKnown RBP10.51□□□□□ -0.73
PTPN20-220ENST00000508715 ZSCAN5CA6NGD5 496 aaPredicted RBP10.51□□□□□ -0.73
PTPN20-220ENST00000508715 KCNK1O00180 336 aa10.51□□□□□ -0.73
PTPN20-220ENST00000508715 MCF2LO15068 1137 aa10.51□□□□□ -0.73
PTPN20-220ENST00000508715 ZNF185O15231 689 aa10.51□□□□□ -0.73
PTPN20-220ENST00000508715 ZFXP17010 805 aaPredicted RBP10.51□□□□□ -0.73
PTPN20-220ENST00000508715 HOXA6P31267 233 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms