RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 C15orf59Q2T9L4 293 aaPredicted RBP21.28■■□□□ 1
CLDND1-216ENST00000507944 ARL13BQ3SXY8 428 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 ARSIQ5FYB1 569 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 NEK5Q6P3R8 708 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 PROSER1Q86XN7 944 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 GALNT15Q8N3T1 639 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 OXR1Q8N573 874 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 ANKRD20A12PQ8NF67 263 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 JOSD2Q8TAC2 188 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 PCMTD1Q96MG8 357 aaPredicted RBP21.28■■□□□ 1
CLDND1-216ENST00000507944 ATP13A1Q9HD20 1204 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 DYRK4Q9NR20 520 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 OR12D3Q9UGF7 316 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 IL36AQ9UHA7 158 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 LIMA1Q9UHB6 759 aaKnown RBP21.28■■□□□ 1
CLDND1-216ENST00000507944 URB1O60287 2271 aaKnown RBP21.28■■□□□ 1
CLDND1-216ENST00000507944 ZFYVE26Q68DK2 2539 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 ZFHX4Q86UP3 3567 aa21.28■■□□□ 1
CLDND1-216ENST00000507944 TDRD6O60522 2096 aaKnown RBP21.27■■□□□ 1
CLDND1-216ENST00000507944 C2CD4BA6NLJ0 364 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 RNF103O00237 685 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 LDOC1O95751 146 aaPredicted RBP21.27■■□□□ 1
CLDND1-216ENST00000507944 UNGP13051 313 aaPredicted RBP21.27■■□□□ 1
CLDND1-216ENST00000507944 EPHA8P29322 1005 aaPredicted RBP21.27■■□□□ 1
CLDND1-216ENST00000507944 BNIP3Q12983 259 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 DPY19L3Q6ZPD9 716 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 DRC7Q8IY82 874 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 NEK11Q8NG66 645 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 GRIN3AQ8TCU5 1115 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 PCDHB18PQ96TA0 734 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 CEP44Q9C0F1 390 aa21.27■■□□□ 1
CLDND1-216ENST00000507944 CCDC86Q9H6F5 360 aaKnown RBP21.27■■□□□ 1
CLDND1-216ENST00000507944 RALYQ9UKM9 306 aaKnown RBP21.27■■□□□ 1
CLDND1-216ENST00000507944 ZZEF1O43149 2961 aa21.27■□□□□ 0.99
CLDND1-216ENST00000507944 CHD5Q8TDI0 1954 aa21.27■□□□□ 0.99
CLDND1-216ENST00000507944 DMXL2Q8TDJ6 3036 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 A0A1W2PQU0 124 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 ENC1O14682 589 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 SLC31A1O15431 190 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 ZNF821O75541 412 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-216ENST00000507944 GJB6O95452 261 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 PTPN9P43378 593 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 SERPINH1P50454 418 aaKnown RBP21.26■□□□□ 0.99
CLDND1-216ENST00000507944 MYL5Q02045 173 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 NRG1Q02297 640 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-216ENST00000507944 PTP4A2Q12974 167 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 ERN2Q76MJ5 926 aaKnown RBP21.26■□□□□ 0.99
CLDND1-216ENST00000507944 STRADAQ7RTN6 431 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 MARCH9Q86YJ5 346 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 EID2Q8N6I1 236 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 KLK6Q92876 244 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 KLHDC7BQ96G42 594 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 CNDP2Q96KP4 475 aaKnown RBP21.26■□□□□ 0.99
CLDND1-216ENST00000507944 HDAC8Q9BY41 377 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 OSBPL2Q9H1P3 480 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 ADAM22Q9P0K1 906 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 CA5BQ9Y2D0 317 aa21.26■□□□□ 0.99
CLDND1-216ENST00000507944 COL5A1P20908 1838 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-216ENST00000507944 WDFY3Q8IZQ1 3526 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 LGALS16A8MUM7 142 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 LEFTY1O75610 366 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 KRT3P12035 628 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
CLDND1-216ENST00000507944 NSFP46459 744 aaKnown RBP21.25■□□□□ 0.99
CLDND1-216ENST00000507944 DNA2P51530 1060 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 ARF5P84085 180 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 UBXN1Q04323 297 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 SMAD1Q15797 465 aaKnown RBP21.25■□□□□ 0.99
CLDND1-216ENST00000507944 STX1AQ16623 288 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 MANEALQ5VSG8 457 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 RWDD4Q6NW29 188 aaKnown RBP21.25■□□□□ 0.99
CLDND1-216ENST00000507944 DHRS13Q6UX07 377 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 HORMAD1Q86X24 394 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 PCDH20Q8N6Y1 951 aaKnown RBP21.25■□□□□ 0.99
CLDND1-216ENST00000507944 CENPIQ92674 756 aaPredicted RBP21.25■□□□□ 0.99
CLDND1-216ENST00000507944 PPP1R16AQ96I34 528 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 RETREG1Q9H6L5 497 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 PCDHGA1Q9Y5H4 931 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 WASF2Q9Y6W5 498 aa21.25■□□□□ 0.99
CLDND1-216ENST00000507944 CACNA1GO43497 2377 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 LRRC10BA6NIK2 292 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 PCDH8O95206 1070 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 PRLRP16471 622 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 RHOQP17081 205 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 RFC1P35251 1148 aaPredicted RBP21.24■□□□□ 0.99
CLDND1-216ENST00000507944 ACVRL1P37023 503 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 ETFBP38117 255 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 HDAC4P56524 1084 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 CLEC16AQ2KHT3 1053 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 ZNF284Q2VY69 593 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 CARD16Q5EG05 197 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 PHF13Q86YI8 300 aaPredicted RBP21.24■□□□□ 0.99
CLDND1-216ENST00000507944 TMEM145Q8NBT3 493 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 HEPHQ9BQS7 1158 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 SELENOOQ9BVL4 669 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 MAGEB5Q9BZ81 275 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 NDFIP2Q9NV92 336 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 FCF1Q9Y324 198 aaKnown RBP21.24■□□□□ 0.99
CLDND1-216ENST00000507944 ACTL7AQ9Y615 435 aa21.24■□□□□ 0.99
CLDND1-216ENST00000507944 FAM149AA5PLN7 773 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms