RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ZFYVE27Q5T4F4 411 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 C11orf63Q6NUN7 778 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 C22orf39Q6P5X5 142 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 Q6ZVU0 165 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 CPNE8Q86YQ8 564 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 RHOT1Q8IXI2 618 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 STK40Q8N2I9 435 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 PCDH20Q8N6Y1 951 aaKnown RBP20.26■□□□□ 0.83
SNX25-204ENST00000506896 ACRBPQ8NEB7 543 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 OR8D1Q8WZ84 308 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 FAM129BQ96TA1 746 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 CALN1Q9BXU9 219 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 KLC2Q9H0B6 622 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 VPS45Q9NRW7 570 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 CYP8B1Q9UNU6 501 aa20.26■□□□□ 0.83
SNX25-204ENST00000506896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 IGHV1OR15-9A0A0B4J2B8 117 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 RCCD1A6NED2 376 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 K7ERQ8 282 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 MCF2LO15068 1137 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 SMAD6O43541 496 aaKnown RBP20.25■□□□□ 0.83
SNX25-204ENST00000506896 BUB1O43683 1085 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 GDF9O60383 454 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 BUB1BO60566 1050 aaPredicted RBP20.25■□□□□ 0.83
SNX25-204ENST00000506896 ADH1BP00325 375 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 VAV1P15498 845 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 COMTP21964 271 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 AMPD1P23109 780 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 CD6P30203 668 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 CREB5Q02930 508 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 DPYSL3Q14195 570 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 INO80DQ53TQ3 878 aaPredicted RBP20.25■□□□□ 0.83
SNX25-204ENST00000506896 USP30Q70CQ3 517 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 LPCAT2Q7L5N7 544 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 VSIG1Q86XK7 387 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 TMEFF1Q8IYR6 380 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 CELF6Q96J87 481 aaKnown RBP20.25■□□□□ 0.83
SNX25-204ENST00000506896 SLC39A8Q9C0K1 460 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 PABPC3Q9H361 631 aaKnown RBP20.25■□□□□ 0.83
SNX25-204ENST00000506896 SMOC1Q9H4F8 434 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 DDX56Q9NY93 547 aaKnown RBP20.25■□□□□ 0.83
SNX25-204ENST00000506896 TFR2Q9UP52 801 aa20.25■□□□□ 0.83
SNX25-204ENST00000506896 ZNF487B1APH4 448 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 ARHGAP6O43182 974 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 NRDCO43847 1150 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 C5AR1P21730 350 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 IL4RP24394 825 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 KIF5AQ12840 1032 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 CST6Q15828 149 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 IFI16Q16666 785 aaKnown RBP20.24■□□□□ 0.83
SNX25-204ENST00000506896 ATP13A4Q4VNC1 1196 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 FAM46CQ5VWP2 391 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 CACUL1Q86Y37 369 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 MMAAQ8IVH4 418 aaKnown RBP20.24■□□□□ 0.83
SNX25-204ENST00000506896 ARHGAP12Q8IWW6 846 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 PLPP6Q8IY26 295 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 NPWQ8N729 165 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 OR2A12Q8NGT7 310 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 ANP32BQ92688 251 aaKnown RBP20.24■□□□□ 0.83
SNX25-204ENST00000506896 CD93Q9NPY3 652 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 RXFP3Q9NSD7 469 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 NCKAP1Q9Y2A7 1128 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 ALG6Q9Y672 507 aa20.24■□□□□ 0.83
SNX25-204ENST00000506896 C1QTNF3-AMACRE9PGA6 284 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 PSTPIP1O43586 416 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 NDUFS2O75306 463 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 CD160O95971 181 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 IL1BP01584 269 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 CD48P09326 243 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 KDELR1P24390 212 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 PTGER3P43115 390 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 DHPSP49366 369 aaPredicted RBP20.23■□□□□ 0.83
SNX25-204ENST00000506896 PAPOLAP51003 745 aaKnown RBP20.23■□□□□ 0.83
SNX25-204ENST00000506896 NAP1L1P55209 391 aaKnown RBP20.23■□□□□ 0.83
SNX25-204ENST00000506896 RPL6Q02878 288 aaKnown RBP20.23■□□□□ 0.83
SNX25-204ENST00000506896 ODF2Q5BJF6 829 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 ERMP1Q7Z2K6 904 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 DAAM2Q86T65 1068 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 LRRC8AQ8IWT6 810 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 TPCN2Q8NHX9 752 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 NETO1Q8TDF5 533 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 FAF2Q96CS3 445 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 LACRTQ9GZZ8 138 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 KLHL11Q9NVR0 708 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 PPM1HQ9ULR3 514 aa20.23■□□□□ 0.83
SNX25-204ENST00000506896 FCF1Q9Y324 198 aaKnown RBP20.23■□□□□ 0.83
SNX25-204ENST00000506896 NYNRINQ9P2P1 1898 aaKnown RBP20.22■□□□□ 0.83
SNX25-204ENST00000506896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.22■□□□□ 0.83
SNX25-204ENST00000506896 LRRD1A4D1F6 860 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 DFFAO00273 331 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 SLC30A4O14863 429 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 BNIP3LO60238 219 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 PRAMEF11O60813 436 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 ZNF821O75541 412 aaPredicted RBP20.22■□□□□ 0.83
SNX25-204ENST00000506896 PRNPP04156 253 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 SLC8A1P32418 973 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 LIMK1P53667 647 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 ANKRD20A8PQ5CZ79 823 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 CARD16Q5EG05 197 aa20.22■□□□□ 0.83
SNX25-204ENST00000506896 LRRC49Q8IUZ0 686 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms