RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ISG20Q96AZ6 181 aaKnown RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 ZNF599Q96NL3 588 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 WDR24Q96S15 920 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 SP110Q9HB58 689 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 PRSS16Q9NQE7 514 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 PRMT8Q9NR22 394 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 SAE1Q9UBE0 346 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 UBA2Q9UBT2 640 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 K7ESF4 209 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 FANCGO15287 622 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 TDGF1P13385 188 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 VAV1P15498 845 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 DGKEP52429 567 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 PDK1Q15118 436 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 C22orf39Q6P5X5 142 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 SLC13A5Q86YT5 568 aaPredicted RBP13.08□□□□□ -0.32
TCOF1-210ENST00000506767 C1orf210Q8IVY1 113 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 CAMKK1Q8N5S9 505 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 PCDH20Q8N6Y1 951 aaKnown RBP13.08□□□□□ -0.32
TCOF1-210ENST00000506767 MAML1Q92585 1016 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 P3H4Q92791 437 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 PBKQ96KB5 322 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 BRD8Q9H0E9 1235 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 SPATA6Q9NWH7 488 aaPredicted RBP13.08□□□□□ -0.32
TCOF1-210ENST00000506767 SLC8A2Q9UPR5 921 aa13.08□□□□□ -0.32
TCOF1-210ENST00000506767 FCF1Q9Y324 198 aaKnown RBP13.08□□□□□ -0.32
TCOF1-210ENST00000506767 TCRBV7S2A1N4TA0A589 114 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 MATN3O15232 486 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 SYNCRIPO60506 623 aaKnown RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 SIN3BO75182 1162 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 TMCC1O94876 653 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 PRLRP16471 622 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 HOXA6P31267 233 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 CXCR5P32302 372 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 COPAP53621 1224 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 OTUD4Q01804 1114 aaKnown RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 SLC10A7Q0GE19 358 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 XRCC4Q13426 336 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 HNRNPDQ14103 355 aaKnown RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 STARD3Q14849 445 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 NOMO1Q15155 1222 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 ACCSLQ4AC99 568 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 PAPD7Q5XG87 772 aaKnown RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 TIGD7Q6NT04 549 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 NYAP1Q6ZVC0 841 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 CCDC13Q8IYE1 715 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 RASGEF1CQ8N431 466 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 OR2A12Q8NGT7 310 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 ACTL9Q8TC94 416 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 LRRN4Q8WUT4 740 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 VOPP1Q96AW1 172 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 OSBPL9Q96SU4 736 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 FAM129BQ96TA1 746 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 LGMNQ99538 433 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 FBRSQ9HAH7 460 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 POLMQ9NP87 494 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 LHX3Q9UBR4 397 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 TTC7AQ9ULT0 858 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-210ENST00000506767 SNX12Q9UMY4 172 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 SHROOM3Q8TF72 1996 aa13.07□□□□□ -0.32
TCOF1-210ENST00000506767 CES2O00748 559 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-210ENST00000506767 MCF2LO15068 1137 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 LAMTOR5O43504 91 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 GSRP00390 522 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 ETF1P62495 437 aaKnown RBP13.06□□□□□ -0.32
TCOF1-210ENST00000506767 NSUN2Q08J23 767 aaKnown RBP eCLIP13.06□□□□□ -0.32
TCOF1-210ENST00000506767 PRKD1Q15139 912 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-210ENST00000506767 SIX1Q15475 284 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-210ENST00000506767 CARD16Q5EG05 197 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 TMCO4Q5TGY1 634 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 Q6ZVU0 165 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 CCNYQ8ND76 341 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 OR2T3Q8NH03 318 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 HAUS1Q96CS2 278 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 ZNF419Q96HQ0 510 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-210ENST00000506767 PSKH2Q96QS6 385 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 MKRN2Q9H000 416 aaKnown RBP13.06□□□□□ -0.32
TCOF1-210ENST00000506767 RSPH9Q9H1X1 276 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-210ENST00000506767 TNKS2Q9H2K2 1166 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 EBF1Q9UH73 591 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 FBXO4Q9UKT5 387 aa13.06□□□□□ -0.32
TCOF1-210ENST00000506767 TCRBV21S2A2A0A5A6 115 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 HACD1B0YJ81 288 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 MUSKO15146 869 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 ALOX15BO15296 676 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 GALR2O43603 387 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 CEP104O60308 925 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 APBB3O95704 486 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 CCNB1P14635 433 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 GABRG2P18507 467 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 CSNK1DP48730 415 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 RENBPP51606 427 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms