RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 MAPK10P53779 464 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 FAM193AP78312 1265 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 MRPS5P82675 430 aaKnown RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 TFAMQ00059 246 aaKnown RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 TIAL1Q01085 375 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 TSPY1Q01534 308 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 NOMO1Q15155 1222 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 FAAH2Q6GMR7 532 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 SCD5Q86SK9 330 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 ZNF280BQ86YH2 543 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 ZCCHC9Q8N567 271 aaKnown RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 PGAP3Q96FM1 320 aaPredicted RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 RSRC1Q96IZ7 334 aaKnown RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 OSBPL8Q9BZF1 889 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 MKRN2Q9H000 416 aaKnown RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 C12orf65Q9H3J6 166 aaKnown RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 KCNK13Q9HB14 408 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 PCDH18Q9HCL0 1135 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 GP6Q9HCN6 339 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 MARCH5Q9NX47 278 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 CTTNBP2NLQ9P2B4 639 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 FZD10Q9ULW2 581 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 TTLL3Q9Y4R7 772 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 FAM92AA1XBS5 289 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 MYBPHLA2RUH7 354 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 DLGAP3O95886 979 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 EOMESO95936 686 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 SBK3P0C264 359 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 HARSP12081 509 aaKnown RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 CTSSP25774 331 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 RWDD2BP57060 319 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 PRKD1Q15139 912 aaPredicted RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 FSCN1Q16658 493 aaKnown RBP6.08□□□□□ -1.44
SCLT1-207ENST00000506233 TIGD5Q53EQ6 642 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 TRIM72Q6ZMU5 477 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 ACOT1Q86TX2 421 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 VSIG1Q86XK7 387 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 MFSD6LQ8IWD5 586 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 STKLD1Q8NE28 680 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 ACVR1CQ8NER5 493 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 CYP3A43Q9HB55 503 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 CBLCQ9ULV8 474 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 AGAP1Q9UPQ3 857 aa6.08□□□□□ -1.44
SCLT1-207ENST00000506233 INO80B-WBP1J3KQ70 363 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 PLXNA2O75051 1894 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 CLEC3AO75596 197 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 WISP3O95389 354 aaPredicted RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 TSHRP16473 764 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 GPLD1P80108 840 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 SMAD3P84022 425 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 TMEM132DQ14C87 1099 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 SMAD2Q15796 467 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 KCNA10Q16322 511 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 PTGISQ16647 500 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 RNF220Q5VTB9 566 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 CYP4F22Q6NT55 531 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 CXCL17Q6UXB2 119 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 KRT78Q8N1N4 520 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 TTC9BQ8N6N2 239 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 IFT81Q8WYA0 676 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 FUBP1Q96AE4 644 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 POPDC2Q9HBU9 364 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 CWC15Q9P013 229 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 MTF2Q9Y483 593 aaPredicted RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 DNALI1O14645 258 aaPredicted RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ALOX15BO15296 676 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 UGT1A9O60656 530 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ZNF623O75123 536 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 KRT5P13647 590 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 LSP1P33241 339 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 NR1H2P55055 460 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 VCPP55072 806 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 HUNKP57058 714 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 GBE1Q04446 702 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 SNX1Q13596 522 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 SLC14A2Q15849 920 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 TFDP3Q5H9I0 405 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 LYSMD3Q7Z3D4 306 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ZNF778Q96MU6 729 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 HNRNPABQ99729 332 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 MAK16Q9BXY0 300 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 UGT1A7Q9HAW7 530 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 UGT1A10Q9HAW8 530 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 UGT1A8Q9HAW9 530 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 EMCNQ9ULC0 261 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ST3GAL5Q9UNP4 418 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 A0A1W2PPM1 405 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 TMEM110-MUSTN1A8MSY1 372 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 MDM4O15151 490 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 CNOT4O95628 575 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ASGR1P07306 291 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ELNP15502 786 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 PTPN9P43378 593 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 PMS2P54278 862 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 ALDH6A1Q02252 535 aaKnown RBP6.07□□□□□ -1.44
SCLT1-207ENST00000506233 TNP2Q05952 138 aa6.07□□□□□ -1.44
SCLT1-207ENST00000506233 UAP1L1Q3KQV9 507 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms