RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 OR12D3Q9UGF7 316 aa17.11■□□□□ 0.33
PDLIM7-215ENST00000506161 DNAI1Q9UI46 699 aa17.11■□□□□ 0.33
PDLIM7-215ENST00000506161 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-215ENST00000506161 MSRB2Q9Y3D2 182 aa17.11■□□□□ 0.33
PDLIM7-215ENST00000506161 WASF2Q9Y6W5 498 aa17.11■□□□□ 0.33
PDLIM7-215ENST00000506161 ARID1BQ8NFD5 2236 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-215ENST00000506161 A0A1B0GTH6 734 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 SYCE3A1L190 88 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 CBX4O00257 560 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 LATO43561 262 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 CHRNA3P32297 505 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 CCR5P51681 352 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 SLC14A1Q13336 389 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 ZNF423Q2M1K9 1284 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 ACAD10Q6JQN1 1059 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 DPY19L3Q6ZPD9 716 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 ZNF571Q7Z3V5 609 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 CHCHD4Q8N4Q1 142 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 KLK6Q92876 244 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 ARHGEF2Q92974 986 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 C2orf49Q9BVC5 232 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 ACE2Q9BYF1 805 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 OSBPL2Q9H1P3 480 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 ATP13A1Q9HD20 1204 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 GPATCH2LQ9NWQ4 482 aa17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 COL5A1P20908 1838 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3DA0A087WVF3 549 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3IA0A087WXS9 549 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3EA0A087X179 549 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3KA0A087X1G2 549 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3FA6NER0 549 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 LRRC72A6NJI9 287 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3LB9A6J9 549 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 CER1O95813 267 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 CALB1P05937 261 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 PLEKP08567 350 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3HP0C7X1 549 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 ZNF883P0CG24 379 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 FERP16591 822 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 SERPINH1P50454 418 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 RACK1P63244 317 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 KRT83P78385 493 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TRIP6Q15654 476 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 C6orf118Q5T5N4 469 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3GQ6DHY5 549 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3CQ6IPX1 549 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 LUZP1Q86V48 1076 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 SPATS2Q86XZ4 545 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TBC1D3Q8IZP1 549 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 GRIN3AQ8TCU5 1115 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 NTAN1Q96AB6 310 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 PEBP4Q96S96 227 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 CBX8Q9HC52 389 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 TMEM248Q9NWD8 314 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
PDLIM7-215ENST00000506161 DDX3XO00571 662 aaKnown RBP eCLIP17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 VILLO15195 856 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 ALOX15BO15296 676 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 FTH1P19P0C7X4 201 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 SKILP12757 684 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 ZNF143P52747 638 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 NR1I3Q14994 352 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 CA9Q16790 459 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 SOWAHCQ53LP3 525 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 ARSIQ5FYB1 569 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 RWDD4Q6NW29 188 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 DNAJC24Q6P3W2 148 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 KDM7AQ6ZMT4 941 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 CYP4V2Q6ZWL3 525 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 MARCH9Q86YJ5 346 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 GATAD2AQ86YP4 633 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 OR6K2Q8NGY2 324 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 MYOCQ99972 504 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 HAUS4Q9H6D7 363 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 FZD10Q9ULW2 581 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 ZFR2Q9UPR6 939 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 DSPP15924 2871 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 MYLKQ15746 1914 aa17.08■□□□□ 0.32
PDLIM7-215ENST00000506161 KPNA3O00505 521 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 LEFTY1O75610 366 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 ATXN1LP0C7T5 689 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 RHOQP17081 205 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 CD38P28907 300 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 PBX1P40424 430 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 SCAPQ12770 1279 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 SCYL2Q6P3W7 929 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 RAB44Q7Z6P3 723 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 SETD7Q8WTS6 366 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 TBC1D31Q96DN5 1066 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 SERAC1Q96JX3 654 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 PPP1R9BQ96SB3 815 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 TM6SF2Q9BZW4 377 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 FZD3Q9NPG1 666 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 AASDHPPTQ9NRN7 309 aa17.07■□□□□ 0.32
PDLIM7-215ENST00000506161 DMXL2Q8TDJ6 3036 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 A0A1B0GTQ1 180 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 C1QTNF3-AMACRE9PGA6 284 aa17.06■□□□□ 0.32
PDLIM7-215ENST00000506161 SPINT1O43278 529 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms