RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NAPGQ99747 312 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 HDAC8Q9BY41 377 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 J3KR12 359 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 KIF5CO60282 957 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 MAGEA3P43357 314 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 SKOR1P84550 965 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 GRSF1Q12849 480 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZBTB17Q13105 803 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 KDELC1Q6UW63 502 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 CAMKK1Q8N5S9 505 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 ALLCQ8N6M5 410 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 OR7D4Q8NG98 312 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 C2orf49Q9BVC5 232 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 ARNT2Q9HBZ2 717 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 PRSS16Q9NQE7 514 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 MRPS17Q9Y2R5 130 aaKnown RBP8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 EDDM13A0A1B0GTR0 161 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 FAM170AA1A519 330 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 CFAP69A5D8W1 941 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 AP1G1O43747 822 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 PTPN3P26045 913 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 IVDP26440 423 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 FNTAP49354 379 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 SUOXP51687 545 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZBTB16Q05516 673 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 P3H1Q32P28 736 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF569Q5MCW4 686 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 SCYL2Q6P3W7 929 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 TTC27Q6P3X3 843 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 C22orf39Q6P5X5 142 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 NPNTQ6UXI9 565 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 TMEM92Q6UXU6 159 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 BZW1Q7L1Q6 419 aaKnown RBP8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 CCDC13Q8IYE1 715 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 SIX5Q8N196 739 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 FAM126AQ9BYI3 521 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 KLHL11Q9NVR0 708 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 NFKBIL1Q9UBC1 381 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 LOC285095A0A1B0GVY8 99 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 SLC7A4O43246 635 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 MTSS1O43312 755 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 KRT10P13645 584 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 MX2P20592 715 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 PDK1Q15118 436 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 MAIP1Q8WWC4 291 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 ASB12Q8WXK4 309 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 MCCC1Q96RQ3 725 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 ORAI3Q9BRQ5 295 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 PCED1AQ9H1Q7 454 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 EIF2B3Q9NR50 452 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 C2orf42Q9NWW7 574 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 SCML1Q9UN30 329 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 TYW5A2RUC4 315 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 LRRD1A4D1F6 860 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 MCF2LO15068 1137 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 SMAD6O43541 496 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 PI15O43692 258 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 CST8O60676 142 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 NTSR1P30989 418 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 KRT81Q14533 505 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 USP30Q70CQ3 517 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 CARNMT1Q8N4J0 409 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 TEKT5Q96M29 485 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 FCRL5Q96RD9 977 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 SIK2Q9H0K1 926 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 EPHX3Q9H6B9 360 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 STON1Q9Y6Q2 735 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 SYNJ2BP-COX16A0A087WUM0 186 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 SOCS5O75159 536 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 MT-CO1P00395 513 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 GM2AP17900 193 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 C17orf53Q8N3J3 647 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZBTB44Q8NCP5 570 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 RNF34Q969K3 372 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 COX16Q9P0S2 106 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 CA14Q9ULX7 337 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 H0Y626 953 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 CREB3O43889 395 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 SNAP91O60641 907 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 SRGAP2O75044 1071 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 TMCC1O94876 653 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 PRLP01236 227 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 RGRP47804 291 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 RPS14P62263 151 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 OTUD4Q01804 1114 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 CDH18Q13634 790 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 LBRQ14739 615 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 GRM3Q14832 879 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 ANO4Q32M45 955 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 C4orf22Q6V702 233 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 PRPF39Q86UA1 669 aaKnown RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 RNF25Q96BH1 459 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 KDM4CQ9H3R0 1056 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 TRHDEQ9UKU6 1024 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 FZD4Q9ULV1 537 aa8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 FARP1Q9Y4F1 1045 aaPredicted RBP8.43□□□□□ -1.06
CDC42SE2-208ENST00000505065 TMEM110-MUSTN1A8MSY1 372 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 SGK1O00141 431 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 PDGFBP01127 241 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms