RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 A0A1W2PPC4 97 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 ANKRD18BA2A2Z9 1011 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 KCNJ18B7U540 433 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 MCIDASD6RGH6 385 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 I6L893 689 aaPredicted RBP2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 IPO5O00410 1097 aaKnown RBP2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 KPNA5O15131 536 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 DHHO43323 396 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 TIMM44O43615 452 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 KCNJ13O60928 360 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 PAK4O96013 591 aaPredicted RBP2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 ITGA5P08648 1049 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 HSPA5P11021 654 aaKnown RBP2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 TSHRP16473 764 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 TNFSF8P32971 234 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 PIK3CBP42338 1070 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 MAGEA8P43361 318 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 TDO2P48775 406 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 TAS2R50P59544 299 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 IFT88Q13099 833 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 TRIM29Q14134 588 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 SLC39A14Q15043 492 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 AAK1Q2M2I8 961 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 AAGABQ6PD74 315 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 Q6ZSV7 163 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZNF367Q7RTV3 350 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 MDGA2Q7Z553 956 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 LCA5Q86VQ0 697 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC25Q86WR0 208 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 LMNTD2Q8IXW0 634 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 EXD3Q8N9H8 876 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 LMNTD1Q8N9Z9 388 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 C1orf131Q8NDD1 294 aaKnown RBP2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 VPS37AQ8NEZ2 397 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 BICD2Q8TD16 824 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 JDP2Q8WYK2 163 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 IP6K1Q92551 441 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 GOLGA1Q92805 767 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 TTC17Q96AE7 1141 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 IGSF21Q96ID5 467 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 COLEC11Q9BWP8 271 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 B3GNT4Q9C0J1 378 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 IL21RQ9HBE5 538 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZNF304Q9HCX3 659 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 DDX21Q9NR30 783 aaKnown RBP eCLIP2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 CHCHD3Q9NX63 227 aaKnown RBP2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 OBP2AQ9NY56 170 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 RGL1Q9NZL6 768 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 IL36RNQ9UBH0 155 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 SUN2Q9UH99 717 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 MYO15BQ96JP2 1530 aa2.22□□□□□ -2.05
HMGB3P17-201ENST00000504195 A0A1B0GU03 582 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 STMND1H3BQB6 276 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 PES1O00541 588 aaKnown RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 APOL1O14791 398 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 HTATSF1O43719 755 aaKnown RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 TAF5LO75529 589 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 NDST3O95803 873 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 TPM3P06753 285 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC175P0C221 793 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 NBPF7P0C2Y1 421 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 DAOP14920 347 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 CD53P19397 219 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 PAX7P23759 505 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ABCD1P33897 745 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 GRK5P34947 590 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 STT3AP46977 705 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 PMS2P54278 862 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ADPRHP54922 357 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 KRTAP12-2P59991 146 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 DUSP6Q16828 381 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC92Q53HC0 331 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ARL13AQ5H913 290 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCSAPQ6IQ19 270 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 FBXO38Q6PIJ6 1188 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 DGLUCYQ7Z3D6 616 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 PALB2Q86YC2 1186 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC146Q8IYE0 955 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 TXLNBQ8N3L3 684 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 KDM1BQ8NB78 822 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 CMASQ8NFW8 434 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 SVIPQ8NHG7 77 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 TTC8Q8TAM2 541 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 FAM216AQ8WUB2 273 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 RSPH1Q8WYR4 309 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 TSR2Q969E8 191 aaKnown RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC47Q96A33 483 aaKnown RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZBTB10Q96DT7 871 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF333Q96JL9 665 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 APOLD1Q96LR9 279 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 RPS6KC1Q96S38 1066 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 IWS1Q96ST2 819 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 GDF15Q99988 308 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ARPC5LQ9BPX5 153 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ACTR5Q9H9F9 607 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 SDF2L1Q9HCN8 221 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 FSCN3Q9NQT6 498 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 MAP3K20Q9NYL2 800 aaKnown RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 KLHL42Q9P2K6 505 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms