RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ADGRF4Q8IZF3 695 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMTC2Q8N394 836 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 TCP11L2Q8N4U5 519 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 ARL14EPQ8N8R7 260 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM47BQ8NA70 645 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 OR52N4Q8NGI2 321 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 ST8SIA4Q92187 359 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZBTB10Q96DT7 871 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 SIGLEC11Q96RL6 698 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 SCNM1Q9BWG6 230 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 PHF7Q9BWX1 381 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 PAIP1Q9H074 479 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 TAOK3Q9H2K8 898 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 MROH8Q9H579 483 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 MOV10Q9HCE1 1003 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM248Q9NWD8 314 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 ALKBH4Q9NXW9 302 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 KLHL13Q9P2N7 655 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 CNOT7Q9UIV1 285 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 FBXO9Q9UK97 447 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 TBX20Q9UMR3 447 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 ARHGAP26Q9UNA1 814 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM90A7PA6NKC0 464 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 C2CD4BA6NLJ0 364 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM90A22PA8MWA6 464 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM90A12PA8MX19 464 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 FAM90A23PA8MXZ1 464 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 KCNJ18B7U540 433 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 ADAM10O14672 748 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 MSI1O43347 362 aaKnown RBP2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 STRNO43815 780 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 TLR2O60603 784 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 GUCY1B2O75343 617 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 HLA-DQA2P01906 255 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 PTMSP20962 102 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 TNFAIP3P21580 790 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 BDNFP23560 247 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 ELF1P32519 619 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 MAN1A1P33908 653 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 KRT9P35527 623 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 DDIT3P35638 169 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 HNF1BP35680 557 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 STAT1P42224 750 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC12A2P55011 1212 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 RPP30P78346 268 aaKnown RBP2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 HSF1Q00613 529 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 RHAGQ02094 409 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 FOXD4Q12950 439 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 GALNT3Q14435 633 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 IL13RA2Q14627 380 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 NAA25Q14CX7 972 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 PGM5Q15124 567 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 GPR68Q15743 365 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 BAK1Q16611 211 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 DAB2IPQ5VWQ8 1189 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 NAPEPLDQ6IQ20 393 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 PDXDC1Q6P996 788 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC22A25Q6T423 547 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 MAATS1Q7Z4T9 603 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 ADGRG6Q86SQ4 1221 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 ARFGAP1Q8N6T3 406 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM217Q8N7C4 229 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 TSPYL6Q8N831 410 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 LSM14AQ8ND56 463 aaKnown RBP2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 RUFY2Q8WXA3 655 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 NCSTNQ92542 709 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 KAT2AQ92830 837 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZUFSPQ96AP4 578 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 SH3KBP1Q96B97 665 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 RNF125Q96EQ8 232 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 APOPT1Q96IL0 206 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZFYVE19Q96K21 471 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 CD180Q99467 661 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 NPLQ9BXD5 320 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 CADM1Q9BY67 442 aaKnown RBP2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 FRMD8Q9BZ67 464 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 TTC12Q9H892 705 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 JMJD4Q9H9V9 463 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 PREBQ9HCU5 417 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 Q9N2J8 555 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 HDAC6Q9UBN7 1215 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 TMEM98Q9Y2Y6 226 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 CYP46A1Q9Y6A2 500 aa2.64□□□□□ -1.99
HMGB1P35-201ENST00000503360 DPPA5A6NC42 116 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 C17orf100A8MU93 164 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 B4DGG1 531 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC28A2O43868 658 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 HBP1O60381 514 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 UGDHO60701 494 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 MBD4O95243 580 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CBX6O95503 412 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CD4P01730 458 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 PSG1P11464 419 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 FCGR2AP12318 317 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CD72P21854 359 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CHRNA5P30532 468 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CIITAP33076 1130 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 GGT5P36269 586 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 GJC1P36383 396 aa2.63□□□□□ -1.99
HMGB1P35-201ENST00000503360 CDKN2AP42771 156 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms