RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 RECQLP46063 649 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 NOP2P46087 812 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 PAPOLAP51003 745 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 CREB5Q02930 508 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 ZNF33AQ06730 810 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 SPEM2Q0P670 501 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 DPYSL3Q14195 570 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 CARD16Q5EG05 197 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 LYSMD4Q5XG99 296 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 TMCO3Q6UWJ1 677 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 DPY19L3Q6ZPD9 716 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 CYP2U1Q7Z449 544 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 FAM124AQ86V42 546 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 SLC41A1Q8IVJ1 513 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 MAP7D3Q8IWC1 876 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 AADATQ8N5Z0 425 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 KCTD6Q8NC69 237 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 CHST14Q8NCH0 376 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 TMIEQ8NEW7 156 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 PIP4K2CQ8TBX8 421 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 FOXJ1Q92949 421 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 FAM131CQ96AQ9 280 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 ZNF670Q9BS34 389 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 GPR174Q9BXC1 333 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 BTBD1Q9H0C5 482 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 PCED1AQ9H1Q7 454 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 PARD6AQ9NPB6 346 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 ETNK2Q9NVF9 386 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 SERGEFQ9UGK8 458 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 SARDHQ9UL12 918 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 FZD4Q9ULV1 537 aa18.57■□□□□ 0.56
PDLIM7-209ENST00000503346 CHD5Q8TDI0 1954 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 A0A1W2PP55 124 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 RCCD1A6NED2 376 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 BTNL10A8MVZ5 291 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 BUB1BO60566 1050 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 PRAMEF11O60813 436 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 TMCC1O94876 653 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 PRNPP04156 253 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 CTSLP07711 333 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 ACSL1P33121 698 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 MPLP40238 635 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 DPP6P42658 865 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 MMRN1Q13201 1228 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 CSRP2Q16527 193 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 LEKR1Q6ZMV7 388 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 ARMCX6Q7L4S7 300 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 HDDC3Q8N4P3 179 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 DEFB119Q8N690 84 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 ACRBPQ8NEB7 543 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 GANCQ8TET4 914 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 FAF2Q96CS3 445 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 CALR3Q96L12 384 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 HSPA12BQ96MM6 686 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 OMDQ99983 421 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 NEUROG2Q9H2A3 272 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 VPS45Q9NRW7 570 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 SEMA4GQ9NTN9 838 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 MFHAS1Q9Y4C4 1052 aa18.56■□□□□ 0.56
PDLIM7-209ENST00000503346 J3KR12 359 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 RNASEH2AO75792 299 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 SEMA4FO95754 770 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 GSRP00390 522 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 COMTP21964 271 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 SERPINB6P35237 376 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 DRD3P35462 400 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 CCNHP51946 323 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 VAV2P52735 878 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 METAP1P53582 386 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 PEAR1Q5VY43 1037 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 OR2AP1Q8NGE2 309 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 PCDH19Q8TAB3 1148 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 RAPGEF5Q92565 580 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 HEPHQ9BQS7 1158 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 CALN1Q9BXU9 219 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 TM6SF2Q9BZW4 377 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 KLHL11Q9NVR0 708 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 UBA2Q9UBT2 640 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 IL36AQ9UHA7 158 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 SALL4Q9UJQ4 1053 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 ALG6Q9Y672 507 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 FRYLO94915 3013 aa18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 RIF1Q5UIP0 2472 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-209ENST00000503346 METTL12A8MUP2 240 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 ZNF487B1APH4 448 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 DFFAO00273 331 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 PJA2O43164 708 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 SLC7A4O43246 635 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 FOXD2O60548 495 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 ZNF806P0C7X5 589 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 ITPKAP23677 461 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 KDELR1P24390 212 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 HOXD12P35452 270 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 DNA2P51530 1060 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 SNRPD1P62314 119 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 IL10RBQ08334 325 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 CYTH1Q15438 398 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 ANKRD20A8PQ5CZ79 823 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 C11orf63Q6NUN7 778 aa18.54■□□□□ 0.56
PDLIM7-209ENST00000503346 VSIG1Q86XK7 387 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms