RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 HYAL1Q12794 435 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 NR1H3Q13133 447 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 ZNF235Q14590 738 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 KLHL38Q2WGJ6 581 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 FNBP1LQ5T0N5 605 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 EMC10Q5UCC4 262 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 STEAP4Q687X5 459 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 RETSATQ6NUM9 610 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 ANKRD54Q6NXT1 300 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 MFN1Q8IWA4 741 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 BBS7Q8IWZ6 715 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.23□□□□□ -0.93
NR1I3-216ENST00000502848 SMARCD2Q92925 531 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 PEX13Q92968 403 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 ISG20Q96AZ6 181 aaKnown RBP9.23□□□□□ -0.93
NR1I3-216ENST00000502848 TCEAL4Q96EI5 215 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 MYEOVQ96EZ4 313 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 SIGLEC10Q96LC7 697 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 AGAP3Q96P47 875 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 EBNA1BP2Q99848 306 aaKnown RBP9.23□□□□□ -0.93
NR1I3-216ENST00000502848 C19orf43Q9BQ61 176 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 FEM1AQ9BSK4 669 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 ACSS3Q9H6R3 686 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 MRM3Q9HC36 420 aaKnown RBP9.23□□□□□ -0.93
NR1I3-216ENST00000502848 ATP13A1Q9HD20 1204 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 BFARQ9NZS9 450 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 UBA2Q9UBT2 640 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-216ENST00000502848 LGALS13Q9UHV8 139 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 SLC24A2Q9UI40 661 aa9.23□□□□□ -0.93
NR1I3-216ENST00000502848 NUP210Q8TEM1 1887 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-216ENST00000502848 EPOPA6NHQ4 379 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 RASGRF2O14827 1237 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ZMPSTE24O75844 475 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 PRAMEF12O95522 483 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 GLP2RO95838 553 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ADH1CP00326 375 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 CPP00450 1065 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 AGTP01019 485 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 HLA-DQB2P05538 268 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 SERPINF2P08697 491 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 CEBPBP17676 345 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 PGAM1P18669 254 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ADRA1AP35348 466 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 MTHFRP42898 656 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ADAM15Q13444 863 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 PDGFRLQ15198 375 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 KYNUQ16719 465 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 CTC1Q2NKJ3 1217 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 BBS9Q3SYG4 887 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 STXBP5Q5T5C0 1151 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 IL31Q6EBC2 164 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ARHGAP36Q6ZRI8 547 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 KIAA0907Q7Z7F0 614 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-216ENST00000502848 RBM23Q86U06 439 aaKnown RBP9.22□□□□□ -0.93
NR1I3-216ENST00000502848 CIR1Q86X95 450 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ARID3BQ8IVW6 561 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-216ENST00000502848 NPAS3Q8IXF0 933 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 PLPP6Q8IY26 295 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 CFAP52Q8N1V2 620 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
NR1I3-216ENST00000502848 FBXO36Q8NEA4 188 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 DDI1Q8WTU0 396 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 DEPDC1BQ8WUY9 529 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 WBP2Q969T9 261 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 PABPC5Q96DU9 382 aaKnown RBP9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ALG14Q96F25 216 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 OXNAD1Q96HP4 312 aaPredicted RBP9.22□□□□□ -0.93
NR1I3-216ENST00000502848 FEM1CQ96JP0 617 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 LMLNQ96KR4 655 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 RIPOR3Q96MK2 946 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ASB16Q96NS5 453 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 CYTH2Q99418 400 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 GORASP1Q9BQQ3 440 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 FSD1LQ9BXM9 530 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 MUC3BQ9H195 1237 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 TMBIM4Q9HC24 238 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 LRRC4CQ9HCJ2 640 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 SPHK2Q9NRA0 654 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 THG1LQ9NWX6 298 aaKnown RBP9.22□□□□□ -0.93
NR1I3-216ENST00000502848 SENP1Q9P0U3 644 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 SAMD15Q9P1V8 674 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ACTL7BQ9Y614 415 aa9.22□□□□□ -0.93
NR1I3-216ENST00000502848 ATG2AQ2TAZ0 1938 aa9.21□□□□□ -0.93
NR1I3-216ENST00000502848 A0A0D9SEW6 157 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 FAM237BA0A1B0GVD1 139 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 J3KR12 359 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 ALDH1A2O94788 518 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 ACSL3O95573 720 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 NFATC1O95644 943 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 SYF2O95926 243 aaKnown RBP9.21□□□□□ -0.94
NR1I3-216ENST00000502848 POLBP06746 335 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 GJA1P17302 382 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 CR2P20023 1033 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 HLA-DPA1P20036 260 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 PRKCHP24723 683 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 ACVRL1P37023 503 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 ELK3P41970 407 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 SGSHP51688 502 aa9.21□□□□□ -0.94
NR1I3-216ENST00000502848 RPL26P61254 145 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms