RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 RGS21Q2M5E4 152 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 EPC2Q52LR7 807 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 IGSF11Q5DX21 431 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZC3H12BQ5HYM0 836 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 KBTBD6Q86V97 674 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 TICAM1Q8IUC6 712 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 THNSL1Q8IYQ7 743 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC30A5Q8TAD4 765 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ACDQ96AP0 544 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 RBM18Q96H35 190 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SERAC1Q96JX3 654 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZFRQ96KR1 1074 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 MARK4Q96L34 752 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 VPS35Q96QK1 796 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CDK5RAP1Q96SZ6 601 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 BARD1Q99728 777 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 MRPL9Q9BYD2 267 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ALOXE3Q9BYJ1 711 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 GPAMQ9HCL2 828 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 KCTD5Q9NXV2 234 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 HSPBP1Q9NZL4 362 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 IGSF9Q9P2J2 1179 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 EPS15L1Q9UBC2 864 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CDH22Q9UJ99 828 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF112Q9UJU3 913 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 POLR2AP24928 1970 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 B9A039 149 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CASQ2O14958 399 aaPredicted RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 DHX15O43143 795 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 B4GAT1O43505 415 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 LYPLA1O75608 230 aaPredicted RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 GJB1P08034 283 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 TXNP10599 105 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF12P17014 697 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 PRKACAP17612 351 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 MATN1P21941 496 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SSTR1P30872 391 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CHRNA3P32297 505 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 RFC1P35251 1148 aaPredicted RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ETV3P41162 512 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 NPTX2P47972 431 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ALDH7A1P49419 539 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 STAT5BP51692 787 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 VAMP7P51809 220 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 AQP5P55064 265 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SMAD4Q13485 552 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CBWD6Q4V339 395 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CBWD3Q5JTY5 395 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CBWD5Q5RIA9 395 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 RGMBQ6NW40 437 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CYP20A1Q6UW02 462 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 FRMD7Q6ZUT3 714 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CHERPQ8IWX8 916 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ELMOD2Q8IZ81 293 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 LGI2Q8N0V4 545 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 DAW1Q8N136 415 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CADM2Q8N3J6 435 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 XXYLT1Q8NBI6 393 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZSCAN18Q8TBC5 510 aaPredicted RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 GIMAP1Q8WWP7 306 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 MOCOSQ96EN8 888 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ASIC4Q96FT7 647 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF486Q96H40 463 aaPredicted RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZBTB45Q96K62 511 aaPredicted RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF778Q96MU6 729 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SPATA33Q96N06 139 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 KLHL32Q96NJ5 620 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 C17orf80Q9BSJ5 609 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 TARS2Q9BW92 718 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRIM55Q9BYV6 548 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 GPR88Q9GZN0 384 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 TXNRD2Q9NNW7 524 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SAYSD1Q9NPB0 183 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLCO3A1Q9UIG8 710 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 RIMS3Q9UJD0 308 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 PCDHB9Q9Y5E1 797 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 PTPRFP10586 1907 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CCL15-CCL14A0A0B4J2E2 113 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 KRT19P08727 400 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 JAK1P23458 1154 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SFNP31947 248 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 FMO5P49326 533 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 NRLP54845 237 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SH3BGRP55822 239 aaPredicted RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 GPX6P59796 221 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 COPZ1P61923 177 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 PHC1P78364 1004 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 GPLD1P80108 840 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SP2Q02086 613 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 NPTX1Q15818 432 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CCNG2Q16589 344 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CCL15Q16663 113 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 MSS51Q4VC12 460 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 TWF2Q6IBS0 349 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 FRMD5Q7Z6J6 570 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 RHPN2Q8IUC4 686 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC22A15Q8IZD6 547 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 DEFB107AQ8IZN7 70 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 PHTF2Q8N3S3 785 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms