RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 CYP2U1Q7Z449 544 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 STK40Q8N2I9 435 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 PCDH20Q8N6Y1 951 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 HSPH1Q92598 858 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 TOE1Q96GM8 510 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 CALR3Q96L12 384 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 FAM129BQ96TA1 746 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 PABPC3Q9H361 631 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 MTG2Q9H4K7 406 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 NOL6Q9H6R4 1146 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 SGK2Q9HBY8 427 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 CWC15Q9P013 229 aaKnown RBP11.7□□□□□ -0.54
HLA-B-254ENST00000497377 FZD4Q9ULV1 537 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 NUP205Q92621 2012 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 SDK1Q7Z5N4 2213 aa11.7□□□□□ -0.54
HLA-B-254ENST00000497377 GVINP1Q7Z2Y8 2422 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 ARHGAP42A6NI28 874 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 RASA4BC9J798 803 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 C1QTNF3-AMACRE9PGA6 284 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 RASA4O43374 803 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 NDUFA10O95299 355 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 VAV1P15498 845 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 ERCC2P18074 760 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 GLDCP23378 1020 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 SLC8A1P32418 973 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 MPLP40238 635 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 SLC1A1P43005 524 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 DHPSP49366 369 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-254ENST00000497377 NUMBP49757 651 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 ARF5P84085 180 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 CCDC15Q0P6D6 951 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 SERINC3Q13530 473 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 DPYSQ14117 519 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 PDK2Q15119 407 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 CSRP2Q16527 193 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 SMTNL2Q2TAL5 461 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 INO80DQ53TQ3 878 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-254ENST00000497377 KCNT1Q5JUK3 1230 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 SYCP2LQ5T4T6 812 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
HLA-B-254ENST00000497377 DAB2IPQ5VWQ8 1189 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 LYSMD4Q5XG99 296 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 LINGO4Q6UY18 593 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 POLNQ7Z5Q5 900 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 RABEPKQ7Z6M1 372 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 ZNF354CQ86Y25 554 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 MMAAQ8IVH4 418 aaKnown RBP11.69□□□□□ -0.54
HLA-B-254ENST00000497377 MAP7D3Q8IWC1 876 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 TMEFF1Q8IYR6 380 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 FRMD1Q8N878 549 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 FAM71BQ8TC56 605 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 HMCESQ96FZ2 354 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 ZNF419Q96HQ0 510 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-254ENST00000497377 BTBD1Q9H0C5 482 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 ARRDC1-AS1Q9H2J1 176 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 LRRC19Q9H756 370 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 PCDH18Q9HCL0 1135 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 OSGEPQ9NPF4 335 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 VPS45Q9NRW7 570 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 FBXL12Q9NXK8 326 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 PCDHA13Q9Y5I0 950 aa11.69□□□□□ -0.54
HLA-B-254ENST00000497377 EPN1Q9Y6I3 576 aaPredicted RBP11.69□□□□□ -0.54
HLA-B-254ENST00000497377 TNRC6BQ9UPQ9 1833 aaKnown RBP11.69□□□□□ -0.54
HLA-B-254ENST00000497377 DMDP11532 3685 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 A0A0A6YYK5 440 aaPredicted RBP11.68□□□□□ -0.54
HLA-B-254ENST00000497377 K7ERQ8 282 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 MID1O15344 667 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 SLC7A4O43246 635 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 SMAD6O43541 496 aaKnown RBP11.68□□□□□ -0.54
HLA-B-254ENST00000497377 BUB1O43683 1085 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 IL1BP01584 269 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 PRNPP04156 253 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 ZNF806P0C7X5 589 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 TCF4P15884 667 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 PSMD8P48556 350 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 GSDMDP57764 484 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 CREB5Q02930 508 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 ZNF33AQ06730 810 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 SPEM2Q0P670 501 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 KRT81Q14533 505 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 MESDQ14696 234 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 PLA2G2CQ5R387 149 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 AFMIDQ63HM1 303 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 TMCO3Q6UWJ1 677 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 CACUL1Q86Y37 369 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 SYT12Q8IV01 421 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 TXLNBQ8N3L3 684 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 DCLK2Q8N568 766 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 TMIEQ8NEW7 156 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 OR2A12Q8NGT7 310 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 GANCQ8TET4 914 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 CSPG4P5Q96PW8 444 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 BAG1Q99933 345 aaPredicted RBP11.68□□□□□ -0.54
HLA-B-254ENST00000497377 OMDQ99983 421 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 GPR174Q9BXC1 333 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 CD93Q9NPY3 652 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 SEMA4GQ9NTN9 838 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms