RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 DPYSL2Q16555 572 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 DUOXA1Q1HG43 343 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 SMTNL2Q2TAL5 461 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 LEKR1Q6ZMV7 388 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 DPY19L3Q6ZPD9 716 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 HDDC3Q8N4P3 179 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 C12orf50Q8NA57 414 aaPredicted RBP16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 PIP4K2CQ8TBX8 421 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 ZNF564Q8TBZ8 553 aaPredicted RBP16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 MRFAP1L1Q96HT8 127 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 NCAPGQ9BPX3 1015 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 CATSPERBQ9H7T0 1116 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 OSGEPQ9NPF4 335 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 ZNHIT6Q9NWK9 470 aaKnown RBP16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 IP6K2Q9UHH9 426 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 WASF2Q9Y6W5 498 aa16.45■□□□□ 0.22
DNMT3A-215ENST00000496570 SLC30A4O14863 429 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 AKR1B10O60218 316 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 BNIP3LO60238 219 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 SERPINF2P08697 491 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 TMEM253P0C7T8 217 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 ERCC2P18074 760 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 CHRNA3P32297 505 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 ADPRHP54922 357 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 POM121L1PQ3SYA9 428 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 PPP6R3Q5H9R7 873 aaPredicted RBP16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 WDR45BQ5MNZ6 344 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 SYCP2LQ5T4T6 812 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 STPG1Q5TH74 334 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 AGBL4Q5VU57 503 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 NCEH1Q6PIU2 408 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 ARHGAP12Q8IWW6 846 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 PCDH20Q8N6Y1 951 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 NPWQ8N729 165 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 NETO2Q8NC67 525 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 TMIEQ8NEW7 156 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 TSC1Q92574 1164 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 ISG20Q96AZ6 181 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 ARRDC3Q96B67 414 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 BIRC7Q96CA5 298 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 EDEM2Q9BV94 578 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 SLC39A8Q9C0K1 460 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 DEF6Q9H4E7 631 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 ZWILCHQ9H900 591 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 EBF2Q9HAK2 575 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 PDFQ9HBH1 243 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 UVRAGQ9P2Y5 699 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 EIF2B4Q9UI10 523 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 NCKAP1Q9Y2A7 1128 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 MFHAS1Q9Y4C4 1052 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 ADAMTS9Q9P2N4 1935 aa16.44■□□□□ 0.22
DNMT3A-215ENST00000496570 MEI4A8MW99 385 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 MYO1FO00160 1098 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 H2AFZP0C0S5 128 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 ENGP17813 658 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 ARSEP51690 589 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 NDST2P52849 883 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 TAS2R38P59533 333 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 BNC1Q01954 994 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CNTN1Q12860 1018 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 TSR1Q2NL82 804 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 PARP15Q460N3 678 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 BOLA3Q53S33 107 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CARD16Q5EG05 197 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 PIP5KL1Q5T9C9 394 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 KIAA0895LQ68EN5 471 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 H2AFVQ71UI9 128 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 POLNQ7Z5Q5 900 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 DSG4Q86SJ6 1040 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 TP53INP2Q8IXH6 220 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 PLPP6Q8IY26 295 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 RGL4Q8IZJ4 473 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CEP76Q8TAP6 659 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 FAM71BQ8TC56 605 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 GANCQ8TET4 914 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 TEKT4Q8WW24 435 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CTNNBL1Q8WYA6 563 aaPredicted RBP16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CELF6Q96J87 481 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CCDC42Q96M95 316 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 OMDQ99983 421 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 PCDH18Q9HCL0 1135 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 ETNK2Q9NVF9 386 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CTTNBP2NLQ9P2B4 639 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CDV3Q9UKY7 258 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 SLC6A14Q9UN76 642 aa16.43■□□□□ 0.22
DNMT3A-215ENST00000496570 CACNA1EQ15878 2313 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 PLXNA2O75051 1894 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 J3KR12 359 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 PLRG1O43660 514 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 LEFTY1O75610 366 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 PROSCO94903 275 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 CFIP05156 583 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 IL4RP24394 825 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 CCNHP51946 323 aaPredicted RBP16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 TAS2R40P59535 323 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 PPP2CBP62714 309 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 PPP2CAP67775 309 aa16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 PUM1Q14671 1186 aaKnown RBP eCLIP16.42■□□□□ 0.22
DNMT3A-215ENST00000496570 ATP13A4Q4VNC1 1196 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms