RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 DOCK4Q8N1I0 1966 aa10.46□□□□□ -0.74
HDAC3-214ENST00000495485 SHROOM3Q8TF72 1996 aa10.46□□□□□ -0.74
HDAC3-214ENST00000495485 NUP205Q92621 2012 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 RASA4BC9J798 803 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 ZBTB24O43167 697 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 RASA4O43374 803 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 RAMP2O60895 175 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 CLDN11O75508 207 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 KRT37O76014 449 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 KRT38O76015 456 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 SUN1O94901 812 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 MBL2P11226 248 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 HMGA1P17096 107 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 PGAM1P18669 254 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 CES1P23141 567 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 SSTR1P30872 391 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 OR1E1P30953 314 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 MAGEA3P43357 314 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 PAPOLAP51003 745 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 GPX6P59796 221 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 ZP2Q05996 745 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 IL10RBQ08334 325 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 CDH17Q12864 832 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 MPP3Q13368 585 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 LAMB3Q13751 1172 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 FASTKD3Q14CZ7 662 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 TMED2Q15363 201 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 SEPT7Q16181 437 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 C5orf22Q49AR2 442 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 HP1BP3Q5SSJ5 553 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 MARC1Q5VT66 337 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 AFMIDQ63HM1 303 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 RAP1GAP2Q684P5 730 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 FBXL22Q6P050 247 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 GRASPQ7Z6J2 395 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 SETD3Q86TU7 594 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 CAND1Q86VP6 1230 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 NLRP14Q86W24 1093 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 SLC26A11Q86WA9 606 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 LRRC6Q86X45 466 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 LGI2Q8N0V4 545 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 NPWQ8N729 165 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 C12orf76Q8N812 135 aaPredicted RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 DYDC1Q8WWB3 177 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 TTC17Q96AE7 1141 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 MTBPQ96DY7 904 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 CFAP36Q96G28 342 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF599Q96NL3 588 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 AGAP3Q96P47 875 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 XPO6Q96QU8 1125 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 FCRL5Q96RD9 977 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 IL12RB2Q99665 862 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 CORO1BQ9BR76 489 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 IL22Q9GZX6 179 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 POMKQ9H5K3 350 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 TRPV4Q9HBA0 871 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 SSU72Q9NP77 194 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 KCNK9Q9NPC2 374 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 INTS9Q9NV88 658 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 OBP2AQ9NY56 170 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 DNMT3BQ9UBC3 853 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 IPO11Q9UI26 975 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF180Q9UJW8 692 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 SNX10Q9Y5X0 201 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 FAM169AQ9Y6X4 670 aa10.45□□□□□ -0.74
HDAC3-214ENST00000495485 MYO18AQ92614 2054 aaKnown RBP10.45□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-214ENST00000495485 COCHO43405 550 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 MAFKO60675 156 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 TBX18O95935 607 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 BRAFP15056 766 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 PGFP49763 221 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 IRAK1P51617 712 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 SLC18A1P54219 525 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 NRLP54845 237 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 OXCT1P55809 520 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 ILF2Q12905 390 aaKnown RBP10.44□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF177Q13360 481 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-214ENST00000495485 MSS51Q4VC12 460 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 PRSS36Q5K4E3 855 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 SPANXN3Q5MJ09 141 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 ADGRF1Q5T601 910 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF783Q6ZMS7 281 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 CAPN12Q6ZSI9 719 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 CHST9Q7L1S5 443 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 EXOC3L1Q86VI1 746 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 TMC8Q8IU68 726 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 ARHGAP12Q8IWW6 846 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 CTAGE3PQ8IX95 158 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF683Q8IZ20 524 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 CCDC33Q8N5R6 958 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 SGSM3Q96HU1 749 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 SIGLEC10Q96LC7 697 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 PAFAH2Q99487 392 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 PRMT1Q99873 361 aaKnown RBP10.44□□□□□ -0.74
HDAC3-214ENST00000495485 FSD1LQ9BXM9 530 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 LRRC3Q9BY71 257 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 KIF9Q9HAQ2 790 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 GLOD4Q9HC38 313 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 PRDM6Q9NQX0 595 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms