RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TBC1D3HP0C7X1 549 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 FAM228BP0C875 321 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 MIPP30301 263 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 HNRNPH3P31942 346 aaKnown RBP18■□□□□ 0.47
HDAC4-211ENST00000494800 PCK1P35558 622 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 ACVRL1P37023 503 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 CCR5P51681 352 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 ARF5P84085 180 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 PIGHQ14442 188 aaPredicted RBP18■□□□□ 0.47
HDAC4-211ENST00000494800 TBC1D3GQ6DHY5 549 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 TBC1D3CQ6IPX1 549 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 ADAT2Q7Z6V5 191 aaKnown RBP18■□□□□ 0.47
HDAC4-211ENST00000494800 VSTM4Q8IW00 320 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 TBC1D3Q8IZP1 549 aaPredicted RBP18■□□□□ 0.47
HDAC4-211ENST00000494800 MINDY1Q8N5J2 469 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 CASKIN2Q8WXE0 1202 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 ISG20Q96AZ6 181 aaKnown RBP18■□□□□ 0.47
HDAC4-211ENST00000494800 THAP2Q9H0W7 228 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 TNKS2Q9H2K2 1166 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 FSCN3Q9NQT6 498 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 ARHGAP20Q9P2F6 1191 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 SARDHQ9UL12 918 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 CEP250Q9BV73 2442 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 CEP192Q8TEP8 1941 aa18■□□□□ 0.47
HDAC4-211ENST00000494800 DCHS1Q96JQ0 3298 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 TM4SF5O14894 197 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 BUB1O43683 1085 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 KDELR3O43731 214 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 CER1O95813 267 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 DRD3P35462 400 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 ZNF252P-AS1Q0IIN9 211 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 GRIK2Q13002 908 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 SEMA3BQ13214 749 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 CARD16Q5EG05 197 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 RYBPQ8N488 228 aaPredicted RBP17.99■□□□□ 0.47
HDAC4-211ENST00000494800 DNAJC7Q99615 494 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 SNRNP25Q9BV90 132 aaKnown RBP17.99■□□□□ 0.47
HDAC4-211ENST00000494800 NUP85Q9BW27 656 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 TRIM7Q9C029 511 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 SLC32A1Q9H598 525 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 ZWILCHQ9H900 591 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 IP6K2Q9UHH9 426 aa17.99■□□□□ 0.47
HDAC4-211ENST00000494800 FCF1Q9Y324 198 aaKnown RBP17.99■□□□□ 0.47
HDAC4-211ENST00000494800 A0A1W2PPC4 97 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 PLRG1O43660 514 aaKnown RBP17.98■□□□□ 0.47
HDAC4-211ENST00000494800 LRCH4O75427 683 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 IGHV4-34P06331 123 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 NUDT1P36639 197 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 EIF4A3P38919 411 aaKnown RBP17.98■□□□□ 0.47
HDAC4-211ENST00000494800 GRIA4P48058 902 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 SNRPD1P62314 119 aaKnown RBP17.98■□□□□ 0.47
HDAC4-211ENST00000494800 RACK1P63244 317 aaKnown RBP17.98■□□□□ 0.47
HDAC4-211ENST00000494800 CNTN1Q12860 1018 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 SLC14A1Q13336 389 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 POM121L1PQ3SYA9 428 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 BOLA3Q53S33 107 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 SLC45A4Q5BKX6 768 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 ARSIQ5FYB1 569 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 PPP6R3Q5H9R7 873 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-211ENST00000494800 DPY19L3Q6ZPD9 716 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 PRPF39Q86UA1 669 aaKnown RBP17.98■□□□□ 0.47
HDAC4-211ENST00000494800 CNGA4Q8IV77 575 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 PLPP6Q8IY26 295 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 UMODL1-AS1Q8N2C9 162 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 GRIN3AQ8TCU5 1115 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 CTNNBL1Q8WYA6 563 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-211ENST00000494800 FAM131CQ96AQ9 280 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 HEPHQ9BQS7 1158 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 TM9SF3Q9HD45 589 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 DNAAF2Q9NVR5 837 aaKnown RBP17.98■□□□□ 0.47
HDAC4-211ENST00000494800 GPATCH2LQ9NWQ4 482 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 LCMT1Q9UIC8 334 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 ANAPC7Q9UJX3 599 aa17.98■□□□□ 0.47
HDAC4-211ENST00000494800 RASA4BC9J798 803 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 MYO1FO00160 1098 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 RASA4O43374 803 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 AKR1B10O60218 316 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 GSRP00390 522 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 CYP1A2P05177 515 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 CSRP1P21291 193 aaKnown RBP17.97■□□□□ 0.47
HDAC4-211ENST00000494800 CSNK1EP49674 416 aaKnown RBP17.97■□□□□ 0.47
HDAC4-211ENST00000494800 NOVA1P51513 510 aaKnown RBP17.97■□□□□ 0.47
HDAC4-211ENST00000494800 CCNHP51946 323 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-211ENST00000494800 NDST2P52849 883 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 C21orf59P57076 290 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 RAD51Q06609 339 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 SLC18A3Q16572 532 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 AGBL4Q5VU57 503 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 RFX8Q6ZV50 586 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 ARFGAP1Q8N6T3 406 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 CHST14Q8NCH0 376 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 C1orf216Q8TAB5 229 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 LRIG1Q96JA1 1093 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 PREBQ9HCU5 417 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 ABHD10Q9NUJ1 306 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 HECAQ9UBI9 543 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-211ENST00000494800 DOCK4Q8N1I0 1966 aa17.97■□□□□ 0.47
HDAC4-211ENST00000494800 SSU72P8A0A1W2PR75 194 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 ARHGAP42A6NI28 874 aa17.96■□□□□ 0.47
HDAC4-211ENST00000494800 H3BRJ5 948 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms