RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 BICD1Q96G01 975 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 MAELQ96JY0 434 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PIGSQ96S52 555 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PPP1R9BQ96SB3 815 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PYM1Q9BRP8 204 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TUBB6Q9BUF5 446 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 COLEC11Q9BWP8 271 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TRIM5Q9C035 493 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 OR10A4Q9H209 315 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 RPAP3Q9H6T3 665 aaPredicted RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TRIM36Q9NQ86 728 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 XPNPEP3Q9NQH7 507 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 INTS10Q9NVR2 710 aaKnown RBP2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TMEM45AQ9NWC5 275 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 NCKIPSDQ9NZQ3 722 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TMOD4Q9NZQ9 345 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 SH3BGRL2Q9UJC5 107 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 STXBP5LQ9Y2K9 1186 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 PCDHGB2Q9Y5G2 931 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 RAD54L2Q9Y4B4 1467 aa2.38□□□□□ -2.03
PTPN12-212ENST00000494248 TDRD9Q8NDG6 1382 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 A0A087WWL8 130 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 A0A088AWK7 358 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 AKR1B15C9JRZ8 316 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SYT5O00445 386 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ACKR2O00590 384 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ACOT8O14734 319 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CAPN9O14815 690 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 INPPL1O15357 1258 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 PRPF4O43172 522 aaKnown RBP eCLIP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 PLA2G6O60733 806 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SRGAP2O75044 1071 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 RTN3O95197 1032 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 PORP16435 677 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 TSHRP16473 764 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 TBXAS1P24557 533 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CCNCP24863 283 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 HTR1BP28222 390 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 UQCRC1P31930 480 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 STIP1P31948 543 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 HADHAP40939 763 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 HSPA7P48741 367 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 POLD2P49005 469 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CTCFP49711 727 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ITGA8P53708 1063 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SLC12A2P55011 1212 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 TIRAPP58753 221 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 YPEL5P62699 121 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 IL1RL1Q01638 556 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 TFCP2Q12800 502 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 BFSP1Q12934 665 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 WTAPQ15007 396 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ANKRD1Q15327 319 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 WSCD2Q2TBF2 565 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 PRTGQ2VWP7 1150 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ZIK1Q3SY52 487 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 NAA16Q6N069 864 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF793Q6ZN11 406 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 FAM47EQ6ZV65 393 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 FAM57BQ71RH2 274 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 MAEAQ7L5Y9 396 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 PPP1R42Q7Z4L9 355 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 DNAJB7Q7Z6W7 309 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 RBM23Q86U06 439 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 PRPF39Q86UA1 669 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 TCP11L2Q8N4U5 519 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SPC24Q8NBT2 197 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF540Q8NDQ6 660 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SPPL3Q8TCT6 385 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 KBTBD7Q8WVZ9 684 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CTNNBL1Q8WYA6 563 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF75CPQ92670 426 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CTHRC1Q96CG8 243 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 RRP36Q96EU6 259 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 APIPQ96GX9 242 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CCDC43Q96MW1 224 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF830Q96NB3 372 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 AGAP3Q96P47 875 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 YME1L1Q96TA2 773 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 P2RX7Q99572 595 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CGRRF1Q99675 332 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 FSD1Q9BTV5 496 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SORBS1Q9BX66 1292 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 VN1R3Q9BXE9 311 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 UNKQ9C0B0 810 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 SIL1Q9H173 461 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 RMI1Q9H9A7 625 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 USP29Q9HBJ7 922 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 FANCFQ9NPI8 374 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 A1CFQ9NQ94 594 aaKnown RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CCDC177Q9NQR7 707 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 KRT84Q9NSB2 600 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 RXFP3Q9NSD7 469 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 ARL8BQ9NVJ2 186 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 AIPL1Q9NZN9 384 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 C6orf203Q9P0P8 240 aaPredicted RBP2.37□□□□□ -2.03
PTPN12-212ENST00000494248 MOSPD1Q9UJG1 213 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 LAMP5Q9UJQ1 280 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 CORO2BQ9UQ03 480 aa2.37□□□□□ -2.03
PTPN12-212ENST00000494248 KIF3AQ9Y496 699 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms