RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 RHOAP61586 193 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 PPIDQ08752 370 aaKnown RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 MTAPQ13126 283 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 ENPP2Q13822 863 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 GAS6Q14393 721 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 RFTN1Q14699 578 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 LBRQ14739 615 aaKnown RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 NOMO1Q15155 1222 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 HNRNPA1L2Q32P51 320 aaKnown RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 TMCO4Q5TGY1 634 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 C22orf39Q6P5X5 142 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 SYT13Q7L8C5 426 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 LRRN4Q8WUT4 740 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 TFB1MQ8WVM0 346 aaKnown RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 ERLEC1Q96DZ1 483 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 CCDC114Q96M63 670 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 TSGA13Q96PP4 275 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 NAP1L3Q99457 506 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 GABRG3Q99928 467 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 FAM118BQ9BPY3 351 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 FERMT1Q9BQL6 677 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 CINPQ9BW66 212 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 CEP44Q9C0F1 390 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 TMEM245Q9H330 911 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 SPATA6Q9NWH7 488 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 DLGAP2Q9P1A6 1054 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 HACD1B0YJ81 288 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 PGRMC1O00264 195 aaKnown RBP14.82□□□□□ -0.04
BRCA1-223ENST00000494123 MATN3O15232 486 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 CD160O95971 181 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 TUBB4AP04350 444 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 PRLRP16471 622 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 RECQLP46063 649 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-223ENST00000494123 EIF3EP60228 445 aaKnown RBP14.82□□□□□ -0.04
BRCA1-223ENST00000494123 ZNF33AQ06730 810 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 XRCC4Q13426 336 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 ZNF235Q14590 738 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 MARC1Q5VT66 337 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 CDKL3Q8IVW4 592 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-223ENST00000494123 RASGEF1CQ8N431 466 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 TMEM105Q8N8V8 129 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 COG1Q8WTW3 980 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 C1QTNF1Q9BXJ1 281 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 TNKS2Q9H2K2 1166 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 MTG2Q9H4K7 406 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 HAUS2Q9NVX0 235 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 SEPT10Q9P0V9 454 aa14.82□□□□□ -0.04
BRCA1-223ENST00000494123 TARSL2A2RTX5 802 aaKnown RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 ZBTB24O43167 697 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 RBP3P10745 1247 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 RENBPP51606 427 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 CCR3P51677 355 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 SLC10A7Q0GE19 358 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 CRY1Q16526 586 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 TMEM31Q5JXX7 168 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 HEATR6Q6AI08 1181 aaKnown RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 DARS2Q6PI48 645 aaKnown RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 Q6ZVU0 165 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 B4GALNT4Q76KP1 1039 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 RYBPQ8N488 228 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 PCDH20Q8N6Y1 951 aaKnown RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 FRS2Q8WU20 508 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 ZNF592Q92610 1267 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 ISG20Q96AZ6 181 aaKnown RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 MS4A14Q96JA4 679 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 CAPZA3Q96KX2 299 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 QKIQ96PU8 341 aaKnown RBP eCLIP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 TM6SF2Q9BZW4 377 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 POLMQ9NP87 494 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 SEPT3Q9UH03 358 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 PRR33A8MZF0 331 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 ZNF185O15231 689 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 FANCGO15287 622 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 GPR37L1O60883 481 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 SIN3BO75182 1162 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 IGSF6O95976 241 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 CCNB1P14635 433 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 VAV1P15498 845 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 MMP13P45452 471 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 CXCL12P48061 93 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 DGKEP52429 567 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 SNRPD1P62314 119 aaKnown RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 HNRNPDQ14103 355 aaKnown RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 PRKD1Q15139 912 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 CYTH1Q15438 398 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 SLC45A4Q5BKX6 768 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 PTPRN2Q92932 1015 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 FATE1Q969F0 183 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 FRMD8P1Q9BZ68 369 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 C11orf16Q9NQ32 467 aa14.81□□□□□ -0.04
BRCA1-223ENST00000494123 POLR3BQ9NW08 1133 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 TTC7AQ9ULT0 858 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 R3HDM2Q9Y2K5 976 aaKnown RBP14.81□□□□□ -0.04
BRCA1-223ENST00000494123 CKAP5Q14008 2032 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 A0A1W2PQF6 199 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 TCRBV21S2A2A0A5A6 115 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 KCNK1O00180 336 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 MTSS1O43312 755 aa14.8□□□□□ -0.04
BRCA1-223ENST00000494123 RNASEH1O60930 286 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms