RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 RBL1P28749 1068 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 CLCN6P51797 869 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 SLC10A7Q0GE19 358 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 SIX1Q15475 284 aaPredicted RBP16.04■□□□□ 0.16
HPS4-216ENST00000493455 SLC45A4Q5BKX6 768 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 ATXN7L2Q5T6C5 722 aaPredicted RBP16.04■□□□□ 0.16
HPS4-216ENST00000493455 TMCO4Q5TGY1 634 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 CWF19L1Q69YN2 538 aaKnown RBP16.04■□□□□ 0.16
HPS4-216ENST00000493455 Q6ZVU0 165 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 CACUL1Q86Y37 369 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 CREG2Q8IUH2 290 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 LRRC49Q8IUZ0 686 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 IL17RCQ8NAC3 791 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 CCDC26Q8TAB7 109 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 NT5MQ9NPB1 228 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 ZNF148Q9UQR1 794 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 STARD13Q9Y3M8 1113 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 ANKRD36A6QL64 1941 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 NCOR1O75376 2440 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 HACD1B0YJ81 288 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 SGK1O00141 431 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 LIASO43766 372 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 ZNF500O60304 480 aaPredicted RBP16.03■□□□□ 0.16
HPS4-216ENST00000493455 JCHAINP01591 159 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 CCNB1P14635 433 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 HOXB2P14652 356 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 HNRNPLP14866 589 aaKnown RBP eCLIP16.03■□□□□ 0.16
HPS4-216ENST00000493455 NTSR1P30989 418 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 MMP13P45452 471 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 NRLP54845 237 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 MAXP61244 160 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 MRPS21P82921 87 aaKnown RBP16.03■□□□□ 0.16
HPS4-216ENST00000493455 ZBTB17Q13105 803 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 XRCC4Q13426 336 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 BYSLQ13895 437 aaKnown RBP16.03■□□□□ 0.16
HPS4-216ENST00000493455 PRKD1Q15139 912 aaPredicted RBP16.03■□□□□ 0.16
HPS4-216ENST00000493455 CYTH1Q15438 398 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 KCTD19Q17RG1 926 aaPredicted RBP16.03■□□□□ 0.16
HPS4-216ENST00000493455 MARC1Q5VT66 337 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 TRMT11Q7Z4G4 463 aaKnown RBP16.03■□□□□ 0.16
HPS4-216ENST00000493455 BBS5Q8N3I7 341 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 OR6K2Q8NGY2 324 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 HTR3CQ8WXA8 447 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 PBXIP1Q96AQ6 731 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 MYO19Q96H55 970 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 FERMT1Q9BQL6 677 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 TMEM121Q9BTD3 319 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 RBM22Q9NW64 420 aaKnown RBP eCLIP16.03■□□□□ 0.16
HPS4-216ENST00000493455 TTC7AQ9ULT0 858 aaPredicted RBP16.03■□□□□ 0.16
HPS4-216ENST00000493455 HS3ST2Q9Y278 367 aa16.03■□□□□ 0.16
HPS4-216ENST00000493455 TTC24A2A3L6 582 aaPredicted RBP16.02■□□□□ 0.16
HPS4-216ENST00000493455 RNF103O00237 685 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 PDE2AO00408 941 aaPredicted RBP16.02■□□□□ 0.16
HPS4-216ENST00000493455 MATN3O15232 486 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 PI15O43692 258 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 SYNCRIPO60506 623 aaKnown RBP16.02■□□□□ 0.16
HPS4-216ENST00000493455 RECQLP46063 649 aaPredicted RBP16.02■□□□□ 0.16
HPS4-216ENST00000493455 KCNJ1P48048 391 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 SLC20A2Q08357 652 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 FZD5Q13467 585 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 STARD3Q14849 445 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 E2F5Q15329 346 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 GSTA5Q7RTV2 222 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 KLHL7Q8IXQ5 586 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 ZNF687Q8N1G0 1237 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 TAB3Q8N5C8 712 aaPredicted RBP16.02■□□□□ 0.16
HPS4-216ENST00000493455 PRELID2Q8N945 189 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 TSEN2Q8NCE0 465 aaKnown RBP16.02■□□□□ 0.16
HPS4-216ENST00000493455 SLC35B2Q8TB61 432 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 MAGOHBQ96A72 148 aaKnown RBP16.02■□□□□ 0.16
HPS4-216ENST00000493455 AGAP3Q96P47 875 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 TSGA13Q96PP4 275 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 BRD8Q9H0E9 1235 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 KLHL8Q9P2G9 620 aaPredicted RBP16.02■□□□□ 0.16
HPS4-216ENST00000493455 SEPT3Q9UH03 358 aa16.02■□□□□ 0.16
HPS4-216ENST00000493455 CKAP5Q14008 2032 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 EDDM13A0A1B0GTR0 161 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 ATP9BO43861 1147 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 ADAM23O75077 832 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 PHF2O75151 1096 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 SIN3BO75182 1162 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 STK10O94804 968 aaKnown RBP16.01■□□□□ 0.15
HPS4-216ENST00000493455 SLC34A2O95436 690 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 IGSF6O95976 241 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 PEX11BO96011 259 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 IFNB1P01574 187 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 HLA-DQB2P05538 268 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 COL9A1P20849 921 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 PTPN3P26045 913 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 RENBPP51606 427 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 GDF10P55107 478 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 C2orf54Q08AI8 447 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 CCNG2Q16589 344 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 EOGTQ5NDL2 527 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 STK40Q8N2I9 435 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 SYNPOQ8N3V7 929 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 PAF1Q8N7H5 531 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 FAM71DQ8N9W8 422 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 GRIN3AQ8TCU5 1115 aa16.01■□□□□ 0.15
HPS4-216ENST00000493455 ZNF599Q96NL3 588 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms