RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CCDC117Q8IWD4 279 aaPredicted RBP9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 BBS5Q8N3I7 341 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 KREMEN2Q8NCW0 462 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 PPHLN1Q8NEY8 458 aaKnown RBP9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 CKAP2Q8WWK9 683 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 MRPS31Q92665 395 aaKnown RBP9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 IMP4Q96G21 291 aaKnown RBP9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 APOPT1Q96IL0 206 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 MAGEB18Q96M61 343 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 ZNF599Q96NL3 588 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 CCT8L2Q96SF2 557 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 TCF25Q9BQ70 676 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 FAM107BQ9H098 131 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 RNF38Q9H0F5 515 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 MAGEH1Q9H213 219 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 MLXIPLQ9NP71 852 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 VPS45Q9NRW7 570 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 GKN1Q9NS71 199 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 SMPD4Q9NXE4 827 aa9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 AGO1Q9UL18 857 aaKnown RBP9.3□□□□□ -0.92
SMARCC1-208ENST00000492896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 TYW5A2RUC4 315 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 LCHNA4D1U4 455 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 TM9SF1O15321 606 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 UGT1A9O60656 530 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 LPXNO60711 386 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 PMPCBO75439 489 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 FAM155BO75949 473 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 VIMP08670 466 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 DRD4P21917 467 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 HOXD9P28356 352 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 CDC25CP30307 473 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ADRA1AP35348 466 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 BMPR1AP36894 532 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ETFBP38117 255 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 CCNFP41002 786 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 CCT5P48643 541 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 SGSHP51688 502 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 OXCT1P55809 520 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 WNT3AP56704 352 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 MAXP61244 160 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 RPS24P62847 133 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 SMAD3P84022 425 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 CYP4F8P98187 520 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 DSC2Q02487 901 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 UBE3AQ05086 875 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ITKQ08881 620 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 SLC10A7Q0GE19 358 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ZNF177Q13360 481 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 LBRQ14739 615 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 SEPT7Q16181 437 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ANKRD20A4Q4UJ75 823 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 PPM1LQ5SGD2 360 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 HHATQ5VTY9 493 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ARMC3Q5W041 872 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 LILRA6Q6PI73 481 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 KDELC1Q6UW63 502 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 CES3Q6UWW8 571 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 PACS1Q6VY07 963 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 CPLX4Q7Z7G2 160 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 SETD3Q86TU7 594 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 TMEM135Q86UB9 458 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ARL14EPQ8N8R7 260 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 BANPQ8N9N5 519 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 HJURPQ8NCD3 748 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 OR7D4Q8NG98 312 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 GDAP1Q8TB36 358 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 DENND1AQ8TEH3 1009 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 WBP2Q969T9 261 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 MRGPRX2Q96LB1 330 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 FCRL3Q96P31 734 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ZNF317Q96PQ6 595 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 PAIP2Q9BPZ3 127 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 UGT1A7Q9HAW7 530 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 UGT1A10Q9HAW8 530 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 UGT1A8Q9HAW9 530 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 PDFQ9HBH1 243 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 MRM3Q9HC36 420 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 TLR9Q9NR96 1032 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 ZFATQ9P243 1243 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 TXNDC16Q9P2K2 825 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 STOML2Q9UJZ1 356 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 LSM7Q9UK45 103 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 IRAK3Q9Y616 596 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 CPQQ9Y646 472 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 FAM169AQ9Y6X4 670 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 NUP210Q8TEM1 1887 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 DOCK6Q96HP0 2047 aa9.29□□□□□ -0.92
SMARCC1-208ENST00000492896 TRAV19A0A0A6YYK7 116 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ZCWPW2A0A1B0GU75 182 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 ILVBLA1L0T0 632 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 C2orf71A6NGG8 1288 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 H3BNC9 293 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 GOLGA8RI6L899 631 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 EBAG9O00559 213 aa9.28□□□□□ -0.92
SMARCC1-208ENST00000492896 TSPAN3O60637 253 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms