RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SLFN11Q7Z7L1 901 aa12.05□□□□□ -0.48
MDC1-207ENST00000492462 ARRDC3Q96B67 414 aa12.05□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D31Q96DN5 1066 aa12.05□□□□□ -0.48
MDC1-207ENST00000492462 CNPY3Q9BT09 278 aa12.05□□□□□ -0.48
MDC1-207ENST00000492462 NOL6Q9H6R4 1146 aaKnown RBP12.05□□□□□ -0.48
MDC1-207ENST00000492462 GAREM1Q9H706 876 aa12.05□□□□□ -0.48
MDC1-207ENST00000492462 GPATCH2LQ9NWQ4 482 aa12.05□□□□□ -0.48
MDC1-207ENST00000492462 LHX6Q9UPM6 363 aa12.05□□□□□ -0.48
MDC1-207ENST00000492462 FCF1Q9Y324 198 aaKnown RBP12.05□□□□□ -0.48
MDC1-207ENST00000492462 SNX11Q9Y5W9 270 aa12.05□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3DA0A087WVF3 549 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3IA0A087WXS9 549 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3EA0A087X179 549 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3KA0A087X1G2 549 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 A0A1W2PPC4 97 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3FA6NER0 549 aaPredicted RBP12.04□□□□□ -0.48
MDC1-207ENST00000492462 LRRC72A6NJI9 287 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 UPK3BL1B0FP48 263 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 C1QTNF9BB2RNN3 333 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3LB9A6J9 549 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 UPK3BL2E5RIL1 263 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 ALOX15BO15296 676 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 FTLP02792 175 aaPredicted RBP12.04□□□□□ -0.48
MDC1-207ENST00000492462 WNT1P04628 370 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3HP0C7X1 549 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 C1QTNF9P0C862 333 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 CHRNA3P32297 505 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 SERPINH1P50454 418 aaKnown RBP12.04□□□□□ -0.48
MDC1-207ENST00000492462 AFF3P51826 1226 aaKnown RBP12.04□□□□□ -0.48
MDC1-207ENST00000492462 TAS2R38P59533 333 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 KLHL30Q0D2K2 578 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 SCAPQ12770 1279 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 PRAMEF14Q5SWL7 426 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 HGSNATQ68CP4 663 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3GQ6DHY5 549 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3CQ6IPX1 549 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 PLEKHA7Q6IQ23 1121 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 ZNF783Q6ZMS7 281 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 DPY19L3Q6ZPD9 716 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TMC6Q7Z403 805 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 DSG4Q86SJ6 1040 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TBC1D3Q8IZP1 549 aaPredicted RBP12.04□□□□□ -0.48
MDC1-207ENST00000492462 ARFGAP1Q8N6T3 406 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 NETO2Q8NC67 525 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 GRIN3AQ8TCU5 1115 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 ARHGEF2Q92974 986 aaKnown RBP12.04□□□□□ -0.48
MDC1-207ENST00000492462 ACE2Q9BYF1 805 aaPredicted RBP12.04□□□□□ -0.48
MDC1-207ENST00000492462 ZDHHC5Q9C0B5 715 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 KLC2Q9H0B6 622 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 OSGEPQ9NPF4 335 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 TMEM248Q9NWD8 314 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 FZD10Q9ULW2 581 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 ANKRD6Q9Y2G4 727 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 ITPR1Q14643 2758 aa12.04□□□□□ -0.48
MDC1-207ENST00000492462 ANKRD62A6NC57 917 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 CYSRT1A8MQ03 144 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 C1QTNF3-AMACRE9PGA6 284 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 KPNA3O00505 521 aaPredicted RBP12.03□□□□□ -0.48
MDC1-207ENST00000492462 PLRG1O43660 514 aaKnown RBP12.03□□□□□ -0.48
MDC1-207ENST00000492462 CREB3O43889 395 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 SPINK2P20155 84 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 PSMA2P25787 234 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 MAT2AP31153 395 aaKnown RBP12.03□□□□□ -0.48
MDC1-207ENST00000492462 L1CAMP32004 1257 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 GKP32189 559 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 GRIA4P48058 902 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 MAPKAPK2P49137 400 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 CCR5P51681 352 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 CLCN6P51797 869 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 UBASH3AP57075 661 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 SFSWAPQ12872 951 aaKnown RBP12.03□□□□□ -0.48
MDC1-207ENST00000492462 FOXC1Q12948 553 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 CA9Q16790 459 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 ARSIQ5FYB1 569 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 FIGNQ5HY92 759 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 PIP5KL1Q5T9C9 394 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 FAM46CQ5VWP2 391 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 RETSATQ6NUM9 610 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 KDF1Q8NAX2 398 aaPredicted RBP12.03□□□□□ -0.48
MDC1-207ENST00000492462 CPLX3Q8WVH0 158 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 VOPP1Q96AW1 172 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 VCPIP1Q96JH7 1222 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 PEBP4Q96S96 227 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 EDEM3Q9BZQ6 932 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 IFNKQ9P0W0 207 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 CNOT8Q9UFF9 292 aaKnown RBP12.03□□□□□ -0.48
MDC1-207ENST00000492462 CA5BQ9Y2D0 317 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 WASF2Q9Y6W5 498 aa12.03□□□□□ -0.48
MDC1-207ENST00000492462 TMEM191CA6NGB0 347 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 H0Y8X5 98 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 TAF4O00268 1085 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 LATO43561 262 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 GZMAP12544 262 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 EPHB2P29323 1055 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 CTSKP43235 329 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 DNA2P51530 1060 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 RACK1P63244 317 aaKnown RBP12.02□□□□□ -0.49
MDC1-207ENST00000492462 SIM1P81133 766 aaPredicted RBP12.02□□□□□ -0.49
MDC1-207ENST00000492462 TEAD4Q15561 434 aa12.02□□□□□ -0.49
MDC1-207ENST00000492462 EFHC2Q5JST6 749 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms