RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TAS2R14Q9NYV8 317 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 LHX6Q9UPM6 363 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 APOBEC2Q9Y235 224 aaKnown RBP9.11□□□□□ -0.95
HDAC3-211ENST00000491581 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
HDAC3-211ENST00000491581 IGLV3-10A0A075B6K4 115 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 POM121BA6NF01 834 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 ENC1O14682 589 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 SCAMP1O15126 338 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 FFAR2O15552 330 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 TEX33O43247 280 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 SPINT1O43278 529 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 PCDHGA12O60330 932 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 NEBLO76041 1014 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 CYP1A1P04798 512 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 ITGAVP06756 1048 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 GIMD1P0DJR0 217 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 RDXP35241 583 aaKnown RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 RFC1P35251 1148 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 SOX5P35711 763 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 NNMTP40261 264 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 GRK6P43250 576 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 HDAC4P56524 1084 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 RPL7AP62424 266 aaKnown RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 CDR2Q01850 454 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 SLC12A1Q13621 1099 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 NCAPHQ15003 741 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF284Q2VY69 593 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 BRMS1LQ5PSV4 323 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 TTC39BQ5VTQ0 682 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 NAPEPLDQ6IQ20 393 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 RWDD4Q6NW29 188 aaKnown RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 GCNT7Q6ZNI0 430 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 PARS2Q7L3T8 475 aaKnown RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 ZNF557Q8N988 423 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 BAP1Q92560 729 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 PGAP3Q96FM1 320 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 EXOC2Q96KP1 924 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 CALN1Q9BXU9 219 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 NOL6Q9H6R4 1146 aaKnown RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 ZDHHC6Q9H6R6 413 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 ATP13A1Q9HD20 1204 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 FTSJ1Q9UET6 329 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 PNMA8BQ9ULN7 279 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-211ENST00000491581 STAP1Q9ULZ2 295 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 SCML1Q9UN30 329 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 HS3ST2Q9Y278 367 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 PCDHGB2Q9Y5G2 931 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 LAMA5O15230 3695 aa9.1□□□□□ -0.95
HDAC3-211ENST00000491581 CEP295Q9C0D2 2601 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 KNL1Q8NG31 2342 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 C2CD4BA6NLJ0 364 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 TMCO5BA8MYB1 307 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 INSIG1O15503 277 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 CCP110O43303 1012 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 TNFSF14O43557 240 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 PCDH8O95206 1070 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 TRIM16O95361 564 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 LDOC1O95751 146 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 PRKCGP05129 697 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 UNGP13051 313 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 MMP8P22894 467 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 ACADVLP49748 655 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 CCNHP51946 323 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 GNA12Q03113 381 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 SULT2A1Q06520 285 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 E2F5Q15329 346 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 FAM182AQ5T1J6 154 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 MANEALQ5VSG8 457 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 SFMBT2Q5VUG0 894 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 E4F1Q66K89 784 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 TMC6Q7Z403 805 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 PRPF39Q86UA1 669 aaKnown RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 NLRP14Q86W24 1093 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 TP53INP2Q8IXH6 220 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 AOPEPQ8N6M6 819 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 DCAF4L2Q8NA75 395 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 ENOX1Q8TC92 643 aaKnown RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 FAM172AQ8WUF8 416 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 BMFQ96LC9 184 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 FAM81BQ96LP2 452 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 PCMTD1Q96MG8 357 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 BBC3Q96PG8 261 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 TRIM7Q9C029 511 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 ZYG11BQ9C0D3 744 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 TCEAL2Q9H3H9 227 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 CCDC86Q9H6F5 360 aaKnown RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 GDF3Q9NR23 364 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 SEPT11Q9NVA2 429 aaKnown RBP9.09□□□□□ -0.95
HDAC3-211ENST00000491581 IL36AQ9UHA7 158 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 KLF15Q9UIH9 416 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 GPSM3Q9Y4H4 160 aa9.09□□□□□ -0.95
HDAC3-211ENST00000491581 LRP4O75096 1905 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 TCRBV5S1A1TA0A578 114 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 PMS2P1A4D2B8 440 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 C1QTNF3-AMACRE9PGA6 284 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 SIGLEC6O43699 453 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 TLX3O43711 291 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 LRIG2O94898 1065 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 PAK4O96013 591 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 THEGLP0DJG4 465 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms