RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ARAP2Q8WZ64 1704 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 CCDC187A0A096LP49 1063 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 LOC105369274A0A096LPK9 316 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 LOC102723532A0A0G2JNH3 316 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 PROM1O43490 865 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 HEXIM1O94992 359 aaKnown RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 ONECUT2O95948 504 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 IFIT1P09914 478 aaKnown RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 ADRA1DP25100 572 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 AVPR2P30518 371 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 CYP2C18P33260 490 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 GRK5P34947 590 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 NR1H2P55055 460 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 CBFBQ13951 182 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 TBRG1Q3YBR2 411 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 CTXN3Q4LDR2 81 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 HERC4Q5GLZ8 1057 aaPredicted RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 L1TD1Q5T7N2 865 aaKnown RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 MAP3K21Q5TCX8 1036 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 KAZNQ674X7 775 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 C16orf89Q6UX73 402 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 RNF207Q6ZRF8 634 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 RINLQ6ZS11 566 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 RASGRP2Q7LDG7 609 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 OR4N4Q8N0Y3 316 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 FAM71DQ8N9W8 422 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 PCYOX1LQ8NBM8 494 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 NPIPB3Q92617 1050 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 HAS1Q92839 578 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 DVL3Q92997 716 aaPredicted RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 RFKQ969G6 155 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 FUBP1Q96AE4 644 aaKnown RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 CTHRC1Q96CG8 243 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 RSPRY1Q96DX4 576 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 C20orf173Q96LM9 149 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 CDK5RAP1Q96SZ6 601 aaKnown RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 PAAF1Q9BRP4 392 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 UPF3BQ9BZI7 483 aaKnown RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 SERHL2Q9H4I8 314 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 ZNF703Q9H7S9 590 aaPredicted RBP5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 ARHGEF3Q9NR81 526 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 RASSF1Q9NS23 344 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 TESMINQ9Y4I5 508 aa5.34□□□□□ -1.55
SSX2IP-208ENST00000490476 FANCMQ8IYD8 2048 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 CREBBPQ92793 2442 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PDE8BO95263 885 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 TBX18O95935 607 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PROS1P07225 676 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 CNPP09543 421 aaKnown RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 DLDP09622 509 aaKnown RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 EGR2P11161 476 aaPredicted RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 MMP8P22894 467 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 BDNFP23560 247 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PTGS2P35354 604 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 IGHMBP2P38935 993 aaKnown RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 RPL15P61313 204 aaKnown RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 TXNL4AP83876 142 aaKnown RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 FOXD4Q12950 439 aaPredicted RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PTPRRQ15256 657 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 LEXMQ3ZCV2 418 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 Q6ZWC4 215 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PARS2Q7L3T8 475 aaKnown RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 LCORLQ8N3X6 602 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 TTC9BQ8N6N2 239 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 ANKRD44Q8N8A2 993 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 AGBL3Q8NEM8 1001 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 UCMAQ8WVF2 138 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 HDAC2Q92769 488 aaKnown RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 ZUFSPQ96AP4 578 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 KTI12Q96EK9 354 aaPredicted RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 COG3Q96JB2 828 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PBKQ96KB5 322 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PIGSQ96S52 555 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 MLST8Q9BVC4 326 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PAIP1Q9H074 479 aaKnown RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 UBE2ZQ9H832 354 aaPredicted RBP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 PI4KBQ9UBF8 816 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 AMFRQ9UKV5 643 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 NIP7Q9Y221 180 aaKnown RBP eCLIP5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 RCE1Q9Y256 329 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 TMEM98Q9Y2Y6 226 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 FBN2P35556 2912 aa5.33□□□□□ -1.56
SSX2IP-208ENST00000490476 POLQO75417 2590 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 GXYLT2A0PJZ3 443 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 PIPSLA2A3N6 862 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 VWA3AA6NCI4 1184 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 PEX12O00623 359 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 TNPO2O14787 897 aaKnown RBP5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 NKX2-8O15522 239 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 SEPT4O43236 478 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 ANP32CO43423 234 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 STARD3NLO95772 234 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 EBLN1P0CF75 366 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 TMIGD3P0DMS9 266 aaPredicted RBP5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 CETPP11597 493 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 NDUFB7P17568 137 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 FOLR3P41439 243 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 MCM2P49736 904 aa5.32□□□□□ -1.56
SSX2IP-208ENST00000490476 CDK7P50613 346 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms