RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SLCO1B1Q9Y6L6 691 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 SCINQ9Y6U3 715 aa17.82■□□□□ 0.44
SEC13-218ENST00000490283 ZSCAN5CA6NGD5 496 aaPredicted RBP17.81■□□□□ 0.44
SEC13-218ENST00000490283 PLK4O00444 970 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 VILLO15195 856 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 CREB3O43889 395 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 SH3BP5O60239 455 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 DFNA5O60443 496 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 ZMPSTE24O75844 475 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 METAP1P53582 386 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 SHC2P98077 582 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 BNC1Q01954 994 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 MAMLD1Q13495 774 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 POLD3Q15054 466 aaPredicted RBP17.81■□□□□ 0.44
SEC13-218ENST00000490283 ZNF571Q7Z3V5 609 aaPredicted RBP17.81■□□□□ 0.44
SEC13-218ENST00000490283 ARHGEF2Q92974 986 aaKnown RBP17.81■□□□□ 0.44
SEC13-218ENST00000490283 FAM131CQ96AQ9 280 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 TTYH3Q9C0H2 523 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 IL21RQ9HBE5 538 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 FZD10Q9ULW2 581 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 FNDC3AQ9Y2H6 1198 aaKnown RBP17.81■□□□□ 0.44
SEC13-218ENST00000490283 PCDHGB2Q9Y5G2 931 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 BZW2Q9Y6E2 419 aaKnown RBP17.81■□□□□ 0.44
SEC13-218ENST00000490283 NUMA1Q14980 2115 aa17.81■□□□□ 0.44
SEC13-218ENST00000490283 CACNA1EQ15878 2313 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 SPAARA0A1B0GVQ0 90 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 A0A1W2PQJ5 194 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 FLRT2O43155 660 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 ATMINO43313 823 aaPredicted RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 RNF8O76064 485 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 FTLP02792 175 aaPredicted RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 MYBL1P10243 752 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 CD38P28907 300 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 HTR7P34969 479 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 ACVRL1P37023 503 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 CCT8P50990 548 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 ARF5P84085 180 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 INAVAQ3KP66 663 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 ZSCAN23Q3MJ62 389 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 SETMARQ53H47 684 aaPredicted RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 CARD16Q5EG05 197 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 ARTNQ5T4W7 220 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 AGBL4Q5VU57 503 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 NAPEPLDQ6IQ20 393 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 PLEKHA7Q6IQ23 1121 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 LAYNQ6UX15 382 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 DPY19L3Q6ZPD9 716 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 TRIM69Q86WT6 500 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 RYBPQ8N488 228 aaPredicted RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 RTL3Q8N8U3 475 aaKnown RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 ISG20Q96AZ6 181 aaKnown RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 ZNF653Q96CK0 615 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 CNTNAP3BQ96NU0 1288 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 HEPHQ9BQS7 1158 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 ORAI3Q9BRQ5 295 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 CNTNAP3Q9BZ76 1288 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 MRPL47Q9HD33 250 aaKnown RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 NDFIP2Q9NV92 336 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 CNOT8Q9UFF9 292 aaKnown RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 DMTF1Q9Y222 760 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 FCF1Q9Y324 198 aaKnown RBP17.8■□□□□ 0.44
SEC13-218ENST00000490283 ADAMTS9Q9P2N4 1935 aa17.8■□□□□ 0.44
SEC13-218ENST00000490283 ASCC3Q8N3C0 2202 aaKnown RBP17.79■□□□□ 0.44
SEC13-218ENST00000490283 EIF3CLB5ME19 914 aaKnown RBP17.79■□□□□ 0.44
SEC13-218ENST00000490283 FGF10O15520 208 aaPredicted RBP17.79■□□□□ 0.44
SEC13-218ENST00000490283 LATO43561 262 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 MAGEC1O60732 1142 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 TRIM16O95361 564 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 CTSLP07711 333 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 SKILP12757 684 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 MAT2AP31153 395 aaKnown RBP17.79■□□□□ 0.44
SEC13-218ENST00000490283 CTSKP43235 329 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 TPI1P60174 286 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 PPP2CBP62714 309 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 PPP2CAP67775 309 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 TRIP6Q15654 476 aaKnown RBP17.79■□□□□ 0.44
SEC13-218ENST00000490283 ARSIQ5FYB1 569 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 E4F1Q66K89 784 aaPredicted RBP17.79■□□□□ 0.44
SEC13-218ENST00000490283 PYROXD2Q8N2H3 581 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 CHST14Q8NCH0 376 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 EIF3CQ99613 913 aaKnown RBP17.79■□□□□ 0.44
SEC13-218ENST00000490283 NCAPGQ9BPX3 1015 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.79■□□□□ 0.44
SEC13-218ENST00000490283 GDF3Q9NR23 364 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 NEU3Q9UQ49 428 aa17.79■□□□□ 0.44
SEC13-218ENST00000490283 DDX3XO00571 662 aaKnown RBP eCLIP17.78■□□□□ 0.44
SEC13-218ENST00000490283 BUB1O43683 1085 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 LEFTY1O75610 366 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 CCNHP51946 323 aaPredicted RBP17.78■□□□□ 0.44
SEC13-218ENST00000490283 NEK3P51956 506 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 YBEYP58557 167 aaPredicted RBP17.78■□□□□ 0.44
SEC13-218ENST00000490283 SNRPD1P62314 119 aaKnown RBP17.78■□□□□ 0.44
SEC13-218ENST00000490283 STAT4Q14765 748 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 ZNF423Q2M1K9 1284 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 PARP15Q460N3 678 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 PIP5KL1Q5T9C9 394 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 NEK5Q6P3R8 708 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 ERN2Q76MJ5 926 aaKnown RBP17.78■□□□□ 0.44
SEC13-218ENST00000490283 SYN2Q92777 582 aaPredicted RBP17.78■□□□□ 0.44
SEC13-218ENST00000490283 CAMK1GQ96NX5 476 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms