RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 GARSP41250 739 aaKnown RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 MAGEA9P43362 315 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 RGRP47804 291 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 FNTBP49356 437 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 DGKEP52429 567 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 METAP1P53582 386 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 COPAP53621 1224 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 SLC10A7Q0GE19 358 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 GALNT2Q10471 571 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 SRSF5Q13243 272 aaKnown RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 CAMK2GQ13555 558 aaPredicted RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 ANGPT1Q15389 498 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 PPP2R5EQ16537 467 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 KCTD19Q17RG1 926 aaPredicted RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 HSF5Q4G112 596 aaPredicted RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 RETSATQ6NUM9 610 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 C22orf39Q6P5X5 142 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 TRMT11Q7Z4G4 463 aaKnown RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 ADAT2Q7Z6V5 191 aaKnown RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 PGBD3Q8N328 593 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 ATPAF2Q8N5M1 289 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.44□□□□□ -1.06
SF1-218ENST00000489544 FRMD1Q8N878 549 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 PRSS33Q8NF86 280 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 MDGA1Q8NFP4 955 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 TSTD1Q8NFU3 115 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 CCDC26Q8TAB7 109 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 RLN3Q8WXF3 142 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 WDR24Q96S15 920 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 FAM129BQ96TA1 746 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 CEP41Q9BYV8 373 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 DONSONQ9NYP3 566 aa8.44□□□□□ -1.06
SF1-218ENST00000489544 UBA2Q9UBT2 640 aaPredicted RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 R3HDM2Q9Y2K5 976 aaKnown RBP8.44□□□□□ -1.06
SF1-218ENST00000489544 CHD5Q8TDI0 1954 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 EDDM13A0A1B0GTR0 161 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 KCNK1O00180 336 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 PLK4O00444 970 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 NPC1O15118 1278 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 INSIG1O15503 277 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 KIF5CO60282 957 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 APBB3O95704 486 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 CTSLP07711 333 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 SP9P0CG40 484 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 COPS2P61201 443 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 MAXP61244 160 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 GNG11P61952 73 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 OTUD4Q01804 1114 aaKnown RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 IL10RBQ08334 325 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 SLC20A2Q08357 652 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 TCF15Q12870 199 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 TFDP2Q14188 446 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 STARD3Q14849 445 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 KIAA1324Q6UXG2 1013 aaKnown RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 DPY19L3Q6ZPD9 716 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 BBS12Q6ZW61 710 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 ZC3H18Q86VM9 953 aaKnown RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 VSIG1Q86XK7 387 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 TMPRSS6Q8IU80 811 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 MMAAQ8IVH4 418 aaKnown RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 PGBD5Q8N414 524 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 RYBPQ8N488 228 aaPredicted RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 FAM160A2Q8N612 972 aaPredicted RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 KDM1BQ8NB78 822 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 TSEN2Q8NCE0 465 aaKnown RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 CCNYQ8ND76 341 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 OR2A12Q8NGT7 310 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 OR2T3Q8NH03 318 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 ACTL9Q8TC94 416 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 GRIN3AQ8TCU5 1115 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 VOPP1Q96AW1 172 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 MS4A14Q96JA4 679 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 MRGPRX1Q96LB2 322 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 NSMCE3Q96MG7 304 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 OLFM3Q96PB7 478 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 POLMQ9NP87 494 aaPredicted RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 SMARCAL1Q9NZC9 954 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 SEPT10Q9P0V9 454 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 BCCIPQ9P287 314 aaKnown RBP eCLIP8.43□□□□□ -1.06
SF1-218ENST00000489544 LHX3Q9UBR4 397 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 EBF1Q9UH73 591 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 SUN2Q9UH99 717 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 EVLQ9UI08 416 aaPredicted RBP8.43□□□□□ -1.06
SF1-218ENST00000489544 SARDHQ9UL12 918 aa8.43□□□□□ -1.06
SF1-218ENST00000489544 ZNF318Q5VUA4 2279 aa8.42□□□□□ -1.06
SF1-218ENST00000489544 TARSL2A2RTX5 802 aaKnown RBP8.42□□□□□ -1.06
SF1-218ENST00000489544 ZSCAN5CA6NGD5 496 aaPredicted RBP8.42□□□□□ -1.06
SF1-218ENST00000489544 ZNF185O15231 689 aa8.42□□□□□ -1.06
SF1-218ENST00000489544 MID1O15344 667 aa8.42□□□□□ -1.06
SF1-218ENST00000489544 CEP104O60308 925 aa8.42□□□□□ -1.06
SF1-218ENST00000489544 PAPSS2O95340 614 aaPredicted RBP8.42□□□□□ -1.06
SF1-218ENST00000489544 ZFXP17010 805 aaPredicted RBP8.42□□□□□ -1.06
SF1-218ENST00000489544 TGM2P21980 687 aa8.42□□□□□ -1.06
SF1-218ENST00000489544 PTPN7P35236 360 aa8.42□□□□□ -1.06
SF1-218ENST00000489544 PSMD8P48556 350 aa8.42□□□□□ -1.06
SF1-218ENST00000489544 VASPP50552 380 aaPredicted RBP8.42□□□□□ -1.06
SF1-218ENST00000489544 CLCN6P51797 869 aa8.42□□□□□ -1.06
SF1-218ENST00000489544 CCNHP51946 323 aaPredicted RBP8.42□□□□□ -1.06
SF1-218ENST00000489544 NRLP54845 237 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms