RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 EMC10Q5UCC4 262 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 MARC1Q5VT66 337 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 C22orf39Q6P5X5 142 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SERPINA13PQ6UXR4 307 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 CCDC105Q8IYK2 499 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 CHPFQ8IZ52 775 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SH2D3CQ8N5H7 860 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 ZNF366Q8N895 744 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 FAM71DQ8N9W8 422 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 NKD2Q969F2 451 aaPredicted RBP12.54□□□□□ -0.4
TRAIP-209ENST00000488860 MRGPRX3Q96LB0 322 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 ZNF599Q96NL3 588 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 KRT12Q99456 494 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 CARD6Q9BX69 1037 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 TNKS2Q9H2K2 1166 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 NT5MQ9NPB1 228 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 LTB4R2Q9NPC1 389 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 CACNA2D2Q9NY47 1150 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 SLC8A2Q9UPR5 921 aa12.54□□□□□ -0.4
TRAIP-209ENST00000488860 TRIOO75962 3097 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 KANSL1LA0AUZ9 987 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CTAGE15A4D2H0 777 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 TTC34A8MYJ7 566 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 MTSS1O43312 755 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 SMAD6O43541 496 aaKnown RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 KLF8O95600 359 aaPredicted RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CD160O95971 181 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 PEX11BO96011 259 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 JCHAINP01591 159 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 HLA-DQB2P05538 268 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 ITGAVP06756 1048 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CTAGE8P0CG41 777 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 HLA-EP13747 358 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 PRKCHP24723 683 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 PTPN3P26045 913 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CHRNA3P32297 505 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 FNTAP49354 379 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 RENBPP51606 427 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 STARD6P59095 220 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 MAXP61244 160 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 IFI35P80217 286 aaPredicted RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 ZNF33AQ06730 810 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 SIGLEC14Q08ET2 396 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 RFTN1Q14699 578 aaPredicted RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CYTH1Q15438 398 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 DLG2Q15700 870 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 DRICH1Q6PGQ1 229 aaPredicted RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 Q6ZVU0 165 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 PRUNE1Q86TP1 453 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CTAGE6Q86UF2 777 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CTAGE4Q8IX94 777 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 RYBPQ8N488 228 aaPredicted RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CEP112Q8N8E3 955 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CCDC89Q8N998 374 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 TSEN2Q8NCE0 465 aaKnown RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 MNS1Q8NEH6 495 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 FLCNQ8NFG4 579 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 RPLP0P6Q8NHW5 317 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 GRK7Q8WTQ7 553 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 CASKIN2Q8WXE0 1202 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 MAML1Q92585 1016 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 AGAP3Q96P47 875 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 ACOX2Q99424 681 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 HAUS2Q9NVX0 235 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 RBM22Q9NW64 420 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 THAP10Q9P2Z0 257 aaPredicted RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 SLCO3A1Q9UIG8 710 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 HS3ST2Q9Y278 367 aa12.53□□□□□ -0.4
TRAIP-209ENST00000488860 MTF2Q9Y483 593 aaPredicted RBP12.53□□□□□ -0.4
TRAIP-209ENST00000488860 FAM170BA6NMN3 283 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ZNF189O75820 626 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ECEL1O95672 775 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 IGSF6O95976 241 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 EPHX1P07099 455 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ETS1P14921 441 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ACTN2P35609 894 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 IL12RB1P42701 662 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 KIR2DL1P43626 348 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 VPS41P49754 854 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 LMNB2Q03252 620 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 SLC20A2Q08357 652 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 WASHC5Q12768 1159 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 CCINQ13939 588 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 HNRNPDQ14103 355 aaKnown RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 E2F5Q15329 346 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 PPP1R7Q15435 360 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 TRIP13Q15645 432 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 FBXO43Q4G163 708 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 INO80DQ53TQ3 878 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 DGKKQ5KSL6 1271 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ATXN7L2Q5T6C5 722 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 Q6ZS52 159 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ARHGEF18Q6ZSZ5 1173 aa12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ZNF572Q7Z3I7 529 aaPredicted RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 TRMT11Q7Z4G4 463 aaKnown RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 METTL3Q86U44 580 aaKnown RBP12.52□□□□□ -0.41
TRAIP-209ENST00000488860 ZNF567Q8N184 647 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms