RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 BUB1O43683 1085 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 LMNAP02545 664 aaKnown RBP19.01■□□□□ 0.63
PTCD3-217ENST00000488801 BYSLQ13895 437 aaKnown RBP19.01■□□□□ 0.63
PTCD3-217ENST00000488801 PAFAH1B3Q15102 231 aaKnown RBP19.01■□□□□ 0.63
PTCD3-217ENST00000488801 CST6Q15828 149 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 INO80DQ53TQ3 878 aaPredicted RBP19.01■□□□□ 0.63
PTCD3-217ENST00000488801 TMCO3Q6UWJ1 677 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 ASCL5Q7RTU5 278 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 KIAA1328Q86T90 577 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 PGBD3Q8N328 593 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 PABPC3Q9H361 631 aaKnown RBP19.01■□□□□ 0.63
PTCD3-217ENST00000488801 TRIM10Q9UDY6 481 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 HPCAL4Q9UM19 191 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 SCML1Q9UN30 329 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 CYP8B1Q9UNU6 501 aa19.01■□□□□ 0.63
PTCD3-217ENST00000488801 FCF1Q9Y324 198 aaKnown RBP19.01■□□□□ 0.63
PTCD3-217ENST00000488801 GRID2IPA4D2P6 1211 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 ZBTB24O43167 697 aaPredicted RBP19■□□□□ 0.63
PTCD3-217ENST00000488801 SPOPO43791 374 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 MFSD11O43934 449 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 TMCC1O94876 653 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 CTSLP07711 333 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 SERPINB6P35237 376 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 MARCKSL1P49006 195 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 PAPOLAP51003 745 aaKnown RBP19■□□□□ 0.63
PTCD3-217ENST00000488801 SPDYCQ5MJ68 293 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 LAIR1Q6GTX8 287 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 ARHGAP36Q6ZRI8 547 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 ZNF662Q6ZS27 426 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 USP30Q70CQ3 517 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 CACUL1Q86Y37 369 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 MAP7D3Q8IWC1 876 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 TXLNBQ8N3L3 684 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 KCTD6Q8NC69 237 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 OR8D1Q8WZ84 308 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 LOXL4Q96JB6 756 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 CALN1Q9BXU9 219 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 DDX56Q9NY93 547 aaKnown RBP19■□□□□ 0.63
PTCD3-217ENST00000488801 WSB2Q9NYS7 404 aaPredicted RBP19■□□□□ 0.63
PTCD3-217ENST00000488801 SARDHQ9UL12 918 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 PPM1HQ9ULR3 514 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 CEP250Q9BV73 2442 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 KNL1Q8NG31 2342 aa19■□□□□ 0.63
PTCD3-217ENST00000488801 LRRD1A4D1F6 860 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 J3KR12 359 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 PEX11BO96011 259 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 ADH1BP00325 375 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 GSRP00390 522 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 CTNNA1P35221 906 aaKnown RBP18.99■□□□□ 0.63
PTCD3-217ENST00000488801 DRD3P35462 400 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 IL10RBQ08334 325 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 ACCSLQ4AC99 568 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 SLC9A4Q6AI14 798 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 DPY19L3Q6ZPD9 716 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 CEP68Q76N32 757 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 DAAM2Q86T65 1068 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 MMAAQ8IVH4 418 aaKnown RBP18.99■□□□□ 0.63
PTCD3-217ENST00000488801 KATNAL2Q8IYT4 538 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 AADATQ8N5Z0 425 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 PLD5Q8N7P1 536 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 NETO2Q8NC67 525 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 FAM122AQ96E09 287 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 RNF157Q96PX1 679 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 LHX3Q9UBR4 397 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 SERGEFQ9UGK8 458 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 INVSQ9Y283 1065 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 WASF2Q9Y6W5 498 aa18.99■□□□□ 0.63
PTCD3-217ENST00000488801 RNF103O00237 685 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 MID1O15344 667 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 RNASEH1O60930 286 aaKnown RBP18.98■□□□□ 0.63
PTCD3-217ENST00000488801 EPN2O95208 641 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 DNTTP04053 509 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 KRT1P04264 644 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 C5AR1P21730 350 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 CD6P30203 668 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 METAP1P53582 386 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 GALNT2Q10471 571 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 KIF5AQ12840 1032 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 TTC31Q49AM3 519 aaPredicted RBP18.98■□□□□ 0.63
PTCD3-217ENST00000488801 SLC36A4Q6YBV0 504 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 PRR23BQ6ZRT6 265 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 CHST14Q8NCH0 376 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 TMIEQ8NEW7 156 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 KRT35Q92764 455 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 CCDC114Q96M63 670 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 TNKS2Q9H2K2 1166 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 FZD4Q9ULV1 537 aa18.98■□□□□ 0.63
PTCD3-217ENST00000488801 MAFKO60675 156 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 CTNNA2P26232 953 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 OXTRP30559 389 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 CHRNA3P32297 505 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 CDKN2BP42772 138 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 PSMD8P48556 350 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 CCNHP51946 323 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-217ENST00000488801 CYTH1Q15438 398 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 CARD16Q5EG05 197 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 PEAR1Q5VY43 1037 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-217ENST00000488801 MFSD7Q6UXD7 560 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
PTCD3-217ENST00000488801 DSG4Q86SJ6 1040 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms