RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 IGFN1Q86VF2 1251 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 TMEM200AQ86VY9 491 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 FAM185AQ8N0U4 392 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 DPP10Q8N608 796 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 HORMAD2Q8N7B1 307 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 OR14A16Q8NHC5 309 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 MORC4Q8TE76 937 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 FAM216AQ8WUB2 273 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 BRI3BPQ8WY22 251 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 FBXO17Q96EF6 278 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 NAA15Q9BXJ9 866 aaKnown RBP2.36□□□□□ -2.03
USP9X-208ENST00000487625 UBA5Q9GZZ9 404 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 IL25Q9H293 177 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 OCIAD1Q9NX40 245 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 POU2F3Q9UKI9 436 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 LZTS1Q9Y250 596 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 RAP2CQ9Y3L5 183 aa2.36□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3DA0A087WVF3 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3IA0A087WXS9 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3EA0A087X179 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3KA0A087X1G2 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 LINC01553A4QN01 128 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3BA6NDS4 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3FA6NER0 549 aaPredicted RBP2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3LB9A6J9 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 PIP5K1BO14986 540 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 SOX30O94993 753 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 MYL3P08590 195 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3HP0C7X1 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 UNGP13051 313 aaPredicted RBP2.35□□□□□ -2.03
USP9X-208ENST00000487625 NPPBP16860 134 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 AMTP48728 403 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 HSPA7P48741 367 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 NUDT6P53370 316 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 ALDH18A1P54886 795 aaKnown RBP2.35□□□□□ -2.03
USP9X-208ENST00000487625 RNASELQ05823 741 aaKnown RBP2.35□□□□□ -2.03
USP9X-208ENST00000487625 SF3A3Q12874 501 aaKnown RBP eCLIP2.35□□□□□ -2.03
USP9X-208ENST00000487625 MPEG1Q2M385 716 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 COBLL1Q53SF7 1204 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3GQ6DHY5 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3CQ6IPX1 549 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 KIAA1324Q6UXG2 1013 aaKnown RBP2.35□□□□□ -2.03
USP9X-208ENST00000487625 ZNF497Q6ZNH5 498 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 MARK2Q7KZI7 788 aaKnown RBP2.35□□□□□ -2.03
USP9X-208ENST00000487625 TBC1D3Q8IZP1 549 aaPredicted RBP2.35□□□□□ -2.03
USP9X-208ENST00000487625 IL17RCQ8NAC3 791 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 CEP76Q8TAP6 659 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 SLC39A13Q96H72 371 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 C8orf48Q96LL4 319 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 TMEM120AQ9BXJ8 343 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 HDHD5Q9BXW7 423 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 HIPK3Q9H422 1215 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 Q9N2J8 555 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 ZDHHC7Q9NXF8 308 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 PCDHGB2Q9Y5G2 931 aa2.35□□□□□ -2.03
USP9X-208ENST00000487625 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 IGLV5-52A0A0A0MRZ9 124 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 AGAP5A6NIR3 686 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 SAC3D1A6NKF1 404 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 RASA4BC9J798 803 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 RASA4O43374 803 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 DNPH1O43598 174 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 XPNPEP2O43895 674 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 KCNJ13O60928 360 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 PRPH2P23942 346 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 TYK2P29597 1187 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 CYP2J2P51589 502 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 ST3GAL1Q11201 340 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 HLTFQ14527 1009 aaKnown RBP eCLIP2.34□□□□□ -2.03
USP9X-208ENST00000487625 HLFQ16534 295 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 BTBD16Q32M84 506 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 PLK5Q496M5 336 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 ZNF484Q5JVG2 852 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 VWA5B1Q5TIE3 1220 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 FAM171A1Q5VUB5 890 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 CCSAPQ6IQ19 270 aaPredicted RBP2.34□□□□□ -2.03
USP9X-208ENST00000487625 HEPHL1Q6MZM0 1159 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 RNF144BQ7Z419 303 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 CCAR1Q8IX12 1150 aaKnown RBP2.34□□□□□ -2.03
USP9X-208ENST00000487625 MIGA1Q8NAN2 632 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 LILRB1Q8NHL6 650 aaPredicted RBP2.34□□□□□ -2.03
USP9X-208ENST00000487625 SPATA20Q8TB22 786 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 WDR60Q8WVS4 1066 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 RIPOR3Q96MK2 946 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 SARGQ9BW04 601 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 STK33Q9BYT3 514 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 MAF1Q9H063 256 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 TM7SF3Q9NS93 570 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 SLC39A10Q9ULF5 831 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 NFU1Q9UMS0 254 aa2.34□□□□□ -2.03
USP9X-208ENST00000487625 COL4A4P53420 1690 aaPredicted RBP2.34□□□□□ -2.04
USP9X-208ENST00000487625 IGHV4-28A0A0C4DH34 117 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 FAM90A18PA6NE21 464 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 FAM90A16PA6NEW6 464 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 MBD3L5A6NJ08 208 aaPredicted RBP2.33□□□□□ -2.04
USP9X-208ENST00000487625 FAM90A9PA6NNJ1 464 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 FAM90A5PA8MXJ8 464 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 HNRNPDLO14979 420 aaKnown RBP2.33□□□□□ -2.04
USP9X-208ENST00000487625 ASNA1O43681 348 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 PLA2G6O60733 806 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms