RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 FTLP02792 175 aaPredicted RBP11.69□□□□□ -0.54
SPEN-205ENST00000487496 ZNF883P0CG24 379 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 EPHB2P29323 1055 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 ETFBP38117 255 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 RECQLP46063 649 aaPredicted RBP11.69□□□□□ -0.54
SPEN-205ENST00000487496 AIF1P55008 147 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 PPP2CBP62714 309 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 PPP2CAP67775 309 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 SIM1P81133 766 aaPredicted RBP11.69□□□□□ -0.54
SPEN-205ENST00000487496 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 ARSIQ5FYB1 569 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 EFHC2Q5JST6 749 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 KCNT1Q5JUK3 1230 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 PIP5KL1Q5T9C9 394 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 DPY19L3Q6ZPD9 716 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 TMC6Q7Z403 805 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 TMIEQ8NEW7 156 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 CNTNAP3BQ96NU0 1288 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 CAMK1GQ96NX5 476 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 CNTNAP3Q9BZ76 1288 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 MAGEH1Q9H213 219 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 TM7SF3Q9NS93 570 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 ANGPTL2Q9UKU9 493 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 FZD10Q9ULW2 581 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 FCF1Q9Y324 198 aaKnown RBP11.69□□□□□ -0.54
SPEN-205ENST00000487496 ACTL7AQ9Y615 435 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 PCNX2A6NKB5 2137 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 A0A1W2PQJ5 194 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 TMEM191CA6NGB0 347 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 KCNK3O14649 394 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 WNT9AO14904 365 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 VILLO15195 856 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 CREB3O43889 395 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 RAMP2O60895 175 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 PRNPP04156 253 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 WNT1P04628 370 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 PSMA2P25787 234 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 CTSKP43235 329 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 TAS2R38P59533 333 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 FAM193AP78312 1265 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 SHC2P98077 582 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 FOXC1Q12948 553 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 HNRNPDQ14103 355 aaKnown RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 SKOR2Q2VWA4 1001 aaPredicted RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 CARD16Q5EG05 197 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 HGSNATQ68CP4 663 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 DBX2Q6ZNG2 339 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 ADAT2Q7Z6V5 191 aaKnown RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 NAXDQ8IW45 347 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 ARFGAP1Q8N6T3 406 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 PCDH20Q8N6Y1 951 aaKnown RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 RTL3Q8N8U3 475 aaKnown RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 GRIN3AQ8TCU5 1115 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 SYN2Q92777 582 aaPredicted RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 ARRDC3Q96B67 414 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 SERAC1Q96JX3 654 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 EPAS1Q99814 870 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 NOL6Q9H6R4 1146 aaKnown RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 CNOT8Q9UFF9 292 aaKnown RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 IL36AQ9UHA7 158 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 WASF2Q9Y6W5 498 aa11.68□□□□□ -0.54
SPEN-205ENST00000487496 NYNRINQ9P2P1 1898 aaKnown RBP11.68□□□□□ -0.54
SPEN-205ENST00000487496 TPRP12270 2363 aaKnown RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 WASH4PA8MWX3 477 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 H0Y8X5 98 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 KDELR3O43731 214 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 LEFTY1O75610 366 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 DESP17661 470 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 CD38P28907 300 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 MAT2AP31153 395 aaKnown RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 DNA2P51530 1060 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 CCNHP51946 323 aaPredicted RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 C21orf59P57076 290 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 GEMIN4P57678 1058 aaKnown RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 CCDC15Q0P6D6 951 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 ZNF423Q2M1K9 1284 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 LEKR1Q6ZMV7 388 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 PRPF39Q86UA1 669 aaKnown RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 TRIM69Q86WT6 500 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 FNIP1Q8TF40 1166 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 SETD7Q8WTS6 366 aaKnown RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 CPLX3Q8WVH0 158 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 ISG20Q96AZ6 181 aaKnown RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 SKA1Q96BD8 255 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 ZNF653Q96CK0 615 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 HEPHQ9BQS7 1158 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 HDAC8Q9BY41 377 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 TRIM7Q9C029 511 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 ISCUQ9H1K1 167 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 PREBQ9HCU5 417 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 DYRK4Q9NR20 520 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 AASDHPPTQ9NRN7 309 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 IFNKQ9P0W0 207 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 HECAQ9UBI9 543 aaPredicted RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 PCOLCE2Q9UKZ9 415 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 HPCAL4Q9UM19 191 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 CAPN11Q9UMQ6 739 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms