RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 FBRSQ9HAH7 460 aa19.74■□□□□ 0.75
PCOLCE-208ENST00000487172 PRSS16Q9NQE7 514 aa19.74■□□□□ 0.75
PCOLCE-208ENST00000487172 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.74■□□□□ 0.75
PCOLCE-208ENST00000487172 PPP1R12AO14974 1030 aaPredicted RBP19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 MAP3K6O95382 1288 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 PEX11BO96011 259 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 PPIDQ08752 370 aaKnown RBP19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 CYTH1Q15438 398 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 C9orf64Q5T6V5 341 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 KIAA1211LQ6NV74 962 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 C22orf39Q6P5X5 142 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 ZNF366Q8N895 744 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 POLR3BQ9NW08 1133 aaPredicted RBP19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 FBXO4Q9UKT5 387 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 ACTL7AQ9Y615 435 aa19.73■□□□□ 0.75
PCOLCE-208ENST00000487172 K7ESF4 209 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 SIN3BO75182 1162 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 TMCC1O94876 653 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 ATP1A1P05023 1023 aaKnown RBP19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 PECAM1P16284 738 aaPredicted RBP19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 XRCC4Q13426 336 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 HNRNPDQ14103 355 aaKnown RBP19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 LEKR1Q6ZMV7 388 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 SLC13A5Q86YT5 568 aaPredicted RBP19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 MAML2Q8IZL2 1156 aaPredicted RBP19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 C17orf53Q8N3J3 647 aaPredicted RBP19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 TTC13Q8NBP0 860 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 TSTD1Q8NFU3 115 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 OR2T3Q8NH03 318 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 NSMCE1Q8WV22 266 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 MAML1Q92585 1016 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 PBKQ96KB5 322 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 CCDC114Q96M63 670 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 MTG2Q9H4K7 406 aa19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 SAE1Q9UBE0 346 aaPredicted RBP19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 FCF1Q9Y324 198 aaKnown RBP19.72■□□□□ 0.75
PCOLCE-208ENST00000487172 ZDBF2Q9HCK1 2354 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 CCDC163A0A0D9SF12 145 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 MCF2LO15068 1137 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 MATN3O15232 486 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 ALOX15BO15296 676 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 GALR2O43603 387 aaPredicted RBP19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 ALDH1A2O94788 518 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 APBB3O95704 486 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 GSRP00390 522 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 PRLRP16471 622 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 COPAP53621 1224 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 SNRPD1P62314 119 aaKnown RBP19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 LBRQ14739 615 aaKnown RBP19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 NOMO1Q15155 1222 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 CARD16Q5EG05 197 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 CCDC181Q5TID7 509 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 RASSF3Q86WH2 238 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 CCDC13Q8IYE1 715 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 TEX26Q8N6G2 289 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 CCNYQ8ND76 341 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 OR2A12Q8NGT7 310 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 ACTL9Q8TC94 416 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 PSKH2Q96QS6 385 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 FAM129BQ96TA1 746 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 SEPT3Q9UH03 358 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 EBF1Q9UH73 591 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 AMACRQ9UHK6 382 aa19.71■□□□□ 0.75
PCOLCE-208ENST00000487172 TCRBV21S2A2A0A5A6 115 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 HACD1B0YJ81 288 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 CES2O00748 559 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 ZBTB24O43167 697 aaPredicted RBP19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 TDGF1P13385 188 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 VAV1P15498 845 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 HSPA9P38646 679 aaKnown RBP19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 RENBPP51606 427 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 OTUD4Q01804 1114 aaKnown RBP19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 NSUN2Q08J23 767 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 SLC10A7Q0GE19 358 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 ELAVL3Q14576 367 aaKnown RBP19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 MARC1Q5VT66 337 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 Q6ZVU0 165 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 BBS5Q8N3I7 341 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 RASGEF1CQ8N431 466 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 OR2AP1Q8NGE2 309 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 OR8D1Q8WZ84 308 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 HHIPQ96QV1 700 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 WDR24Q96S15 920 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 LGMNQ99538 433 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 RSPH9Q9H1X1 276 aaPredicted RBP19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 LHX3Q9UBR4 397 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 FARP1Q9Y4F1 1045 aaPredicted RBP19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 SHROOM3Q8TF72 1996 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 CACNA1IQ9P0X4 2223 aa19.7■□□□□ 0.74
PCOLCE-208ENST00000487172 GABRG2P18507 467 aa19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 CXCR5P32302 372 aa19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 RECQLP46063 649 aaPredicted RBP19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 CSNK1DP48730 415 aa19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 ETF1P62495 437 aaKnown RBP19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 PRKD1Q15139 912 aaPredicted RBP19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 ZNF528Q3MIS6 628 aa19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 PAPD7Q5XG87 772 aaKnown RBP19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 TMPRSS6Q8IU80 811 aa19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 STK40Q8N2I9 435 aa19.69■□□□□ 0.74
PCOLCE-208ENST00000487172 TFB1MQ8WVM0 346 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms