RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 XPO6Q96QU8 1125 aaKnown RBP7.18□□□□□ -1.26
SF3A3-206ENST00000487062 CYP2S1Q96SQ9 504 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 LRRC3Q9BY71 257 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 LMAN2LQ9H0V9 348 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 SLC25A51Q9H1U9 297 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 NOL6Q9H6R4 1146 aaKnown RBP7.18□□□□□ -1.26
SF3A3-206ENST00000487062 CASS4Q9NQ75 786 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 MAN1C1Q9NR34 630 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 ZDHHC7Q9NXF8 308 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 SENP1Q9P0U3 644 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 PSMC3IPQ9P2W1 217 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF212Q9UDV6 495 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 RABGEF1Q9UJ41 708 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 STOML2Q9UJZ1 356 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 TTLL3Q9Y4R7 772 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 ACTL7BQ9Y614 415 aa7.18□□□□□ -1.26
SF3A3-206ENST00000487062 BRCA2P51587 3418 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 IQANK1A0A1B0GTG1 560 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 A0A1W2PRU2 124 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 H0Y626 953 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 H3BNC9 293 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 J3KR12 359 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF197O14709 1029 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TSPAN3O60637 253 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 PRAMEF11O60813 436 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TBL1XO60907 577 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 CLASP2O75122 1294 aaKnown RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 HLA-DQB2P05538 268 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 POLBP06746 335 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 INHBAP08476 426 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 POU2F2P09086 479 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 MYOGP15173 224 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 PGAM1P18669 254 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 KRT15P19012 456 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 DNAJB1P25685 340 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 MGAT1P26572 445 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 GBP2P32456 591 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 AVPR1AP37288 418 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 GRIA1P42261 906 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 MAGEA10P43363 369 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 EPHA5P54756 1037 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 OXCT1P55809 520 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 SESN2P58004 480 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 RPS24P62847 133 aaKnown RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TNK2Q07912 1038 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 ITKQ08881 620 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 MTM1Q13496 603 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 NAB1Q13506 487 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 SPARCL1Q14515 664 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF235Q14590 738 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 RFTN1Q14699 578 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 LBRQ14739 615 aaKnown RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TMED2Q15363 201 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 SHHQ15465 462 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TERF2Q15554 542 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 MPPE1Q53F39 396 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TNFAIP8L3Q5GJ75 292 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 SPANXN3Q5MJ09 141 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 C9orf50Q5SZB4 431 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 GPR158Q5T848 1215 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 LGSNQ5TDP6 509 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 ARMC3Q5W041 872 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 STEAP4Q687X5 459 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 KCTD11Q693B1 232 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 IL31Q6EBC2 164 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 ADGRD1Q6QNK2 874 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 Q6ZNB5 142 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 HTR3DQ70Z44 454 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 CYS1Q717R9 158 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 IGDCC3Q8IVU1 814 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 CFAP52Q8N1V2 620 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 CPXM2Q8N436 756 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TEX26Q8N6G2 289 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 CNTD1Q8N815 330 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 OR52K1Q8NGK4 314 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 SLC22A17Q8WUG5 538 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 CDKL2Q92772 493 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 PABPC5Q96DU9 382 aaKnown RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TMA16Q96EY4 203 aaKnown RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 ZFRQ96KR1 1074 aaKnown RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 SLC22A12Q96S37 553 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 PAFAH2Q99487 392 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TBL1YQ9BQ87 522 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 SELENOSQ9BQE4 189 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 MLPHQ9BV36 600 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 FSD1LQ9BXM9 530 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 CAPS2Q9BXY5 557 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 POLR1EQ9GZS1 481 aaKnown RBP7.17□□□□□ -1.26
SF3A3-206ENST00000487062 IL22Q9GZX6 179 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TASP1Q9H6P5 420 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 ATP13A1Q9HD20 1204 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 NT5MQ9NPB1 228 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 VPS45Q9NRW7 570 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TBK1Q9UHD2 729 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 MSRAQ9UJ68 235 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 TBC1D30Q9Y2I9 924 aa7.17□□□□□ -1.26
SF3A3-206ENST00000487062 NUP210Q8TEM1 1887 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms