RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 PLK2Q9NYY3 685 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 RNF112Q9ULX5 631 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 ATP6AP2A0A1C7CYW4 349 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 FAM72CH0Y354 149 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 AOC2O75106 756 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 ATP6AP2O75787 350 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 APOA4P06727 396 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 ATP5C1P36542 298 aaKnown RBP13.43□□□□□ -0.26
HMGN1-216ENST00000486741 ZNF460Q14592 562 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 FAM72AQ5TYM5 149 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 FAM72DQ6L9T8 149 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 FAM72BQ86X60 149 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 RSPH1Q8WYR4 309 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 HDAC10Q969S8 669 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 ZYG11BQ9C0D3 744 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 ALG9Q9H6U8 611 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 ENTPD7Q9NQZ7 604 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 FBXO5Q9UKT4 447 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 PLA2G4CQ9UP65 541 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 KIAA0100Q14667 2235 aaKnown RBP13.43□□□□□ -0.26
HMGN1-216ENST00000486741 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 PRR5-ARHGAP8B1AHC4 643 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 PIRO00625 290 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 PYGLP06737 847 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 NMBRP28336 390 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 NNMTP40261 264 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 ARHGAP8P85298 464 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 RAD51Q06609 339 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 CLNKQ7Z7G1 428 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 MON1AQ86VX9 555 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 BANPQ8N9N5 519 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 OR52K2Q8NGK3 314 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 MS4A4AQ96JQ5 239 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 TSC22D3Q99576 134 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 EPB41L4BQ9H329 900 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 XPR1Q9UBH6 696 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 FBXW11Q9UKB1 542 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 SLC8A2Q9UPR5 921 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 CHKBQ9Y259 395 aa13.43□□□□□ -0.26
HMGN1-216ENST00000486741 MPOP05164 745 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 BPGMP07738 259 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 MYL4P12829 197 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 TPSB2P20231 275 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 FMO4P31512 558 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 ABCE1P61221 599 aaKnown RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 SLC10A2Q12908 348 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 NOGQ13253 232 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 FLOT2Q14254 428 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 TPSAB1Q15661 275 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 CCDC153Q494R4 210 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 AGKQ53H12 422 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 MARCH8Q5T0T0 291 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 ESRP1Q6NXG1 681 aaKnown RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 OR6K2Q8NGY2 324 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 NCLNQ969V3 563 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 ACBD6Q9BR61 282 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 WDR55Q9H6Y2 383 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 DCLRE1BQ9H816 532 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 GLOD4Q9HC38 313 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 CRLS1Q9UJA2 301 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 TRMT6Q9UJA5 497 aaKnown RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 MOSPD1Q9UJG1 213 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 LRG1P02750 347 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 HMOX2P30519 316 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 MSX2P35548 267 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 GMPRP36959 345 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 GPR15P49685 360 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 MPP1Q00013 466 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 TMEM259Q4ZIN3 620 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 SNX32Q86XE0 403 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 TMPRSS6Q8IU80 811 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 DCAKDQ8WVC6 231 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 SCLYQ96I15 445 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 PPP1R2P1Q96PQ5 205 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 POMKQ9H5K3 350 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 TMEM216Q9P0N5 145 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 PKNOX1P55347 436 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 GALNTL6Q49A17 601 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 FBXO48Q5FWF7 155 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 DENND6AQ8IWF6 608 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 SMG8Q8ND04 991 aaKnown RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 GANCQ8TET4 914 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 PIF1Q9H611 641 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 F8W8V4 182 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 DPYSL4O14531 572 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 FGF10O15520 208 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 CA12O43570 354 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 ZCCHC18P0CG32 403 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 GRIA4P48058 902 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 PGGT1BP53609 377 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 BTKQ06187 659 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 KCNJ11Q14654 390 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 DDX53Q86TM3 631 aaKnown RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 TDRPQ86YL5 185 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 MRPS31Q92665 395 aaKnown RBP13.42□□□□□ -0.26
HMGN1-216ENST00000486741 CLPTM1LQ96KA5 538 aa13.42□□□□□ -0.26
HMGN1-216ENST00000486741 CCDC167Q9P0B6 97 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms