RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 FAM124AQ86V42 546 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 CCDC50Q8IVM0 306 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 RYBPQ8N488 228 aaPredicted RBP12.07□□□□□ -0.48
HPS4-214ENST00000485842 ATPAF2Q8N5M1 289 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 PCDH20Q8N6Y1 951 aaKnown RBP12.07□□□□□ -0.48
HPS4-214ENST00000485842 PQLC3Q8N755 202 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 LRRC57Q8N9N7 239 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 GRIN3AQ8TCU5 1115 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 GANCQ8TET4 914 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 KRT35Q92764 455 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 FAF2Q96CS3 445 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 PDLIM2Q96JY6 352 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
HPS4-214ENST00000485842 CEP44Q9C0F1 390 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 LZTFL1Q9NQ48 299 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
HPS4-214ENST00000485842 RAB23Q9ULC3 237 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 SMG5Q9UPR3 1016 aaKnown RBP12.07□□□□□ -0.48
HPS4-214ENST00000485842 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.07□□□□□ -0.48
HPS4-214ENST00000485842 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
HPS4-214ENST00000485842 CAPN6Q9Y6Q1 641 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 WDFY4Q6ZS81 3184 aa12.07□□□□□ -0.48
HPS4-214ENST00000485842 SPAG17Q6Q759 2223 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 IGHV1OR15-9A0A0B4J2B8 117 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 APOL1O14791 398 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 MID1O15344 667 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 ZNF217O75362 1048 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 FTCDO95954 541 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 TPMTP51580 245 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 POM121L1PQ3SYA9 428 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 CARD16Q5EG05 197 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 ATXN7L2Q5T6C5 722 aaPredicted RBP12.06□□□□□ -0.48
HPS4-214ENST00000485842 KAZNQ674X7 775 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 DPY19L3Q6ZPD9 716 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 PEX26Q7Z412 305 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 DSG4Q86SJ6 1040 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 KATNAL2Q8IYT4 538 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 SYCE1Q8N0S2 351 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 CHST14Q8NCH0 376 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 OR2A12Q8NGT7 310 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 OR6K2Q8NGY2 324 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 NKD2Q969F2 451 aaPredicted RBP12.06□□□□□ -0.48
HPS4-214ENST00000485842 RNF157Q96PX1 679 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 FAM129BQ96TA1 746 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 MAK16Q9BXY0 300 aaKnown RBP12.06□□□□□ -0.48
HPS4-214ENST00000485842 EPC1Q9H2F5 836 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 PABPC3Q9H361 631 aaKnown RBP12.06□□□□□ -0.48
HPS4-214ENST00000485842 ZDHHC6Q9H6R6 413 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 PDFQ9HBH1 243 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 USP36Q9P275 1121 aaKnown RBP12.06□□□□□ -0.48
HPS4-214ENST00000485842 MBD1Q9UIS9 605 aaPredicted RBP12.06□□□□□ -0.48
HPS4-214ENST00000485842 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 PACSIN2Q9UNF0 486 aaPredicted RBP12.06□□□□□ -0.48
HPS4-214ENST00000485842 PPP2R2CQ9Y2T4 447 aa12.06□□□□□ -0.48
HPS4-214ENST00000485842 THADAQ6YHU6 1953 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 CXorf51AA0A1B0GTR3 108 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 A0A1W2PP55 124 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 CCDC66A2RUB6 948 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ZNF487B1APH4 448 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 C1QTNF3-AMACRE9PGA6 284 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 MCF2LO15068 1137 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ALOX15BO15296 676 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ZNF821O75541 412 aaPredicted RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 RNASEH2AO75792 299 aaKnown RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 ZRANB2O95218 330 aaKnown RBP eCLIP12.05□□□□□ -0.48
HPS4-214ENST00000485842 IGSF6O95976 241 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ADH1BP00325 375 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 KRT10P13645 584 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 CTNNA2P26232 953 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 CHRNA3P32297 505 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 SLC8A1P32418 973 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 CTNNA1P35221 906 aaKnown RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 CCNHP51946 323 aaPredicted RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 METAP1P53582 386 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 RPL6Q02878 288 aaKnown RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 GBE1Q04446 702 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ZBTB16Q05516 673 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 IL10RBQ08334 325 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 PAFAH1B3Q15102 231 aaKnown RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 ELF2Q15723 593 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 PLK5Q496M5 336 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 SPOCD1Q6ZMY3 1216 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ARMCX6Q7L4S7 300 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 METTL3Q86U44 580 aaKnown RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 NT5DC3Q86UY8 548 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 VSIG1Q86XK7 387 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 RNF10Q8N5U6 811 aaKnown RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 DEFB119Q8N690 84 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 PLD5Q8N7P1 536 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 EXD1Q8NHP7 514 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 PIP4K2CQ8TBX8 421 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 CASKIN2Q8WXE0 1202 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ISG20Q96AZ6 181 aaKnown RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 RBM41Q96IZ5 413 aaKnown RBP12.05□□□□□ -0.48
HPS4-214ENST00000485842 EXOC2Q96KP1 924 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 GDAP1L1Q96MZ0 367 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 OMDQ99983 421 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 KCNF1Q9H3M0 494 aa12.05□□□□□ -0.48
HPS4-214ENST00000485842 ITM2CQ9NQX7 267 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms