RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 PTK2BQ14289 1009 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 PTGR1Q14914 329 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 BTBD16Q32M84 506 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 ZNF569Q5MCW4 686 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TTC39AQ5SRH9 613 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 NUGGCQ68CJ6 796 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3GQ6DHY5 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3CQ6IPX1 549 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 MDGA2Q7Z553 956 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TBC1D3Q8IZP1 549 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 CENPIQ92674 756 aaPredicted RBP5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 KAT2AQ92830 837 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TMEM120AQ9BXJ8 343 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 SPAG4Q9NPE6 437 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 OBP2BQ9NPH6 170 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 CNTN6Q9UQ52 1028 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 IGSF1Q8N6C5 1336 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 CPSF1Q10570 1443 aaKnown RBP5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 PPIP5K1Q6PFW1 1433 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 NFAT5O94916 1531 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 KCPQ6ZWJ8 1503 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 C5P01031 1676 aa5.12□□□□□ -1.59
SMARCC1-207ENST00000485833 TAF1LQ8IZX4 1826 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 BRCA1P38398 1863 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 PDE4DIPQ5VU43 2346 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 IGKV2D-30A0A075B6S6 120 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 A0A087WV62 115 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 MBD3L5A6NJ08 208 aaPredicted RBP5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 LGALS16A8MUM7 142 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 FOXO6A8MYZ6 492 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 CCKARP32238 428 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 NANOS2P60321 138 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 PPATQ06203 517 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 ODF3L2Q3SX64 289 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 C10orf76Q5T2E6 689 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 RTL10Q7L3V2 364 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 ZNF527Q8NB42 609 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 HMGB4Q8WW32 186 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 LPAR1Q92633 364 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 LYZL4Q96KX0 146 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 CAMK1GQ96NX5 476 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 KRTAP1-5Q9BYS1 174 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 ZNF700Q9H0M5 742 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 TASP1Q9H6P5 420 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 TNFSF13BQ9Y275 285 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 LRCH1Q9Y2L9 728 aa5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 COPG1Q9Y678 874 aaKnown RBP5.11□□□□□ -1.59
SMARCC1-207ENST00000485833 PXDNLA1KZ92 1463 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 CXorf65A6NEN9 183 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 MCIDASD6RGH6 385 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 MSI1O43347 362 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 HOXB2P14652 356 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 SERPINB3P29508 390 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 P2RX3P56373 397 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 TNFAIP2Q03169 654 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 GALNT3Q14435 633 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 PGBD2Q6P3X8 592 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 TOGARAM2Q6ZUX3 1019 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 CCDC146Q8IYE0 955 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 CLEC4CQ8WTT0 213 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 TMEM174Q8WUU8 243 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 EID2BQ96D98 161 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 ADAD1Q96M93 576 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 KATNAL1Q9BW62 490 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 WDR12Q9GZL7 423 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 MRPL44Q9H9J2 332 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 IL21RQ9HBE5 538 aa5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 LIN7CQ9NUP9 197 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-207ENST00000485833 UBR3Q6ZT12 1888 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 KIF13BQ9NQT8 1826 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 EIF3AQ14152 1382 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 KCNJ18B7U540 433 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 SYT5O00445 386 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 MDM4O15151 490 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 SMAD6O43541 496 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 SKAP2O75563 359 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 NEURL1O76050 574 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 IFNA2P01563 188 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 ITGA2BP08514 1039 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 SETSIPP0DME0 302 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 ADPRHP54922 357 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 SEMA3AQ14563 771 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 PFKFB4Q16877 469 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 SYCP2LQ5T4T6 812 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 ATPAF1Q5TC12 328 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 ERAP2Q6P179 960 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 MORC1Q86VD1 984 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 OR1N1Q8NGS0 311 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 RTKNQ9BST9 563 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 CDK19Q9BWU1 502 aa5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 SORBS1Q9BX66 1292 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-207ENST00000485833 RGPD2P0DJD1 1756 aa5.09□□□□□ -1.6
SMARCC1-207ENST00000485833 TNRC6CQ9HCJ0 1690 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-207ENST00000485833 EFCAB8A8MWE9 144 aa5.08□□□□□ -1.6
SMARCC1-207ENST00000485833 H0YGN5 161 aa5.08□□□□□ -1.6
SMARCC1-207ENST00000485833 SPTLC2O15270 562 aa5.08□□□□□ -1.6
SMARCC1-207ENST00000485833 LCKP06239 509 aa5.08□□□□□ -1.6
SMARCC1-207ENST00000485833 GYS1P13807 737 aa5.08□□□□□ -1.6
SMARCC1-207ENST00000485833 PDIA3P30101 505 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-207ENST00000485833 CDC25AP30304 524 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms